| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0331 |
|---|
| Symbol | |
|---|
| ID | 6109111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 347431 |
|---|
| End bp | 348795 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641620088 |
|---|
| Product | GTP-binding protein HSR1-related |
|---|
| Protein accession | YP_001747206 |
|---|
| Protein GI | 170719518 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0486] Predicted GTPase |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.308056 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAGC CACTGAAACT GGCCGTGGTC GGCCACACCA ATGTCGGCAA GACCTCGCTG
CTGCGCACCC TGACCCGCGA TGTCGGCTTC GGCGAGGTGT CTCATCGCCC GAGCACCACC
CGCCACGTCG AGGGCGCGCG CCTTTCGGTG GACGGTGAGC CGCTGCTTGA GCTCTACGAT
ACCCCCGGGC TGGAAGATGC CATTGCCTTG CTCGACTACC TGGAGCGCCT CGAACGGCCG
GGCGAGCGCC TGGACGGCCC GGCACGGCTG GAGCGCTTTC TGCAGGGCAG CGAAGCACGT
CAGCGCTTCG AGCAGGAAGC CAAGGTGCTG CGCCAGTTGC TGGCCAGCAA CGCCGGCCTG
TATGTGATCG ATGCCCGCGA GCCGGTGCTG GCCAAATACC GCGACGAACT GGAGGTGCTG
GCCAGTTGCG GCAAGCCATT GCTGCCGGTG CTCAACTTCG TCGCCAGCAG CCAGCATCGC
GAACCTGAAT GGCGCGAGGC CCTGGCCCGC CTCGGGCTGC ATGCGCTGGT ACGGTTCGAC
AGCGTTGCGC CTCCCGAAGA CGGCGAGCGC CGCCTTTACG AGAGCTTGGC ATTGCTGCTT
GAAGACGCCC GCCCCGCCCT GCAGCGGCTG ATCGACGACC AGCAGGCACA GCGGCTGGCC
CGCCAGCACA GCGGTAAACG GCTGATCGCA GAGCTGCTGC TCGACTGCGC AGCATGTCGG
CGCAGCGTCG AAACTGAACC AGCGGCTGAA GCCAAGGCCA TCGAGGCCTT GCGCCAAGAT
GTGCGCCAGC GAGAACAGCG CTGCGTCGAA GCGCTTCTGA AGCTCTACGG TTTCCGTCGC
GAAGATGCCA ATGCCGGTGA CCTGCCGCTG TTGAACGGGC GCTGGGGCGA TGACCTGTTC
AACCCTGAAA CCTTGAAGCT ATTGGGCGTA CGCCTGGGCA GCGGCGTGGC GGCAGGGGCA
GCGGCCGGCG CGGGGGTCGA CCTGCTGGTC GGTGGCCTTA CGCTGGGTGC TGCCGCCTTG
GCCGGAGCCA TTGCCGGCGG AGCCCTGCAG ACTGCACGCA ACTATGGCGC ACGGTTGATG
GGCAAACTGA AGGGCCAGCG CGAGCTGACG GTGGATGACA CGGTGTTGCG GCTATTGGCG
TTGCGTCAGC AACAGTTGAT GGCAGCACTG GATACCCGCG GGCATGCAGC ACAGAACAGT
ATTCGCCTGA ATGAGCCGGA CGAGAAAACC TGGCGTGAAG GCAAGCTTCC CGAGGCGCTG
AGCAAAGCGC GGGCGCATCC GCAGTGGTCG ACGCTCAATC CGGGGGCGCG GGTGAACCAG
ACTGAGCGGC AGGAACAGCT GGAAGCACTG GTATTGCAGA TTTGA
|
|---|
| Protein sequence | MTEPLKLAVV GHTNVGKTSL LRTLTRDVGF GEVSHRPSTT RHVEGARLSV DGEPLLELYD
TPGLEDAIAL LDYLERLERP GERLDGPARL ERFLQGSEAR QRFEQEAKVL RQLLASNAGL
YVIDAREPVL AKYRDELEVL ASCGKPLLPV LNFVASSQHR EPEWREALAR LGLHALVRFD
SVAPPEDGER RLYESLALLL EDARPALQRL IDDQQAQRLA RQHSGKRLIA ELLLDCAACR
RSVETEPAAE AKAIEALRQD VRQREQRCVE ALLKLYGFRR EDANAGDLPL LNGRWGDDLF
NPETLKLLGV RLGSGVAAGA AAGAGVDLLV GGLTLGAAAL AGAIAGGALQ TARNYGARLM
GKLKGQRELT VDDTVLRLLA LRQQQLMAAL DTRGHAAQNS IRLNEPDEKT WREGKLPEAL
SKARAHPQWS TLNPGARVNQ TERQEQLEAL VLQI
|
|---|
| |