| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0200 |
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| Symbol | |
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| ID | 6108979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 203829 |
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| End bp | 205130 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641619956 |
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| Product | D-amino acid dehydrogenase small subunit |
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| Protein accession | YP_001747075 |
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| Protein GI | 170719387 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00229652 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGAGTTC TGGTACTTGG TAGCGGTGTA ATCGGAACCG CCAGTGCCTA TTACCTGGCC
CGGCAAGGTT TTGAAGTGAC TGTGGTCGAT CGCCAACCGG CGGTGGCGAT GGAAACCAGC
TTCGCCAACG CAGGCCAGAT CTCGCCCGGC TACGCCTCGC CGTGGGCTGC TCCAGGCGTG
CCGCTCAAAG CCATCAAGTG GCTGCTGGAG CGCCACGCGC CATTGGCCAT CAAGCTGACC
GGCGACGTCG ACCAGTACCT GTGGATGGCA CAGATGCTGC GCAACTGCAC CGCCAGCCGG
TATGCAGTGA ACAAGGAGCG CATGGTGCGC CTGTCTGAGT ACAGCCGCGA TTGCCTCGAC
GAACTGCGCG CCGAAACCGG TATCGCCTAC GAAAGCCGTA CTCTGGGCAC TACTCAGCTG
TTCCGTACCC AGGCTCAGCT TGATGCTGCT GCCAAGGACA TCGCAGTGCT CGAGCAGTCG
GGCGTGCCCT ATGAACTGCT GGACCGCGAT GGCATTGCTC GCGTCGAACC TGCCTTGGCT
GGGGTCAAGG ACATTCTTGC CGGCGCCCTG CGCCTGCCCA ACGACCAGAC CGGCGATTGC
CAGCTGTTCA CCACCAAGCT TGCTGAAATG GCCCTCAAGC TGGGTGTCGA ATTCCGCTTT
GGCCAGGACA TCCAGCGCCT GGACTTCGCC GGTGACCGAA TCAACGGCGT ATGGGTCGAC
GGCAAGCTGG AAACCGCCGA CCGCTACGTG CTGGCGCTGG GCAGCTACTC GCCGCAGATG
CTCAAACCGC TGGGTATCAA GGCGCCGGTG TACCCGCTCA AGGGTTATTC GCTGACCGTG
CCGATCACCA ACGCCGACAT GGCGCCGACC TCGACCATTC TCGATGAGAC CTACAAGGTC
GCCATCACCC GCTTCGACAA CCGTATCCGT GTCGGTGGAA TGGCTGAGAT AGCCGGTTTT
GACCTGTCGC TTAACCCACG CCGGCGCGAA ACACTGGAGA TGATCGTCAA CGACCTTTAT
CCTCGCGGCG GTGACCTGAG CCAGGCCAGT TTCTGGACCG GTCTGCGTCC GGCGACCCCG
GATGGAACCC CGATTGTGGG TGCCACCGCA TTCCGTAACC TGTTCCTCAA CACCGGCCAC
GGAACTCTGG GTTGGACCAT GGCCTGTGGT TCCGGGCGCC TGCTGGCTGA CCTGATTGCG
CGCAAAAAGC CGCAAATCAG CGCTGAAGGG CTGGATATTT CACGGTATGG CAAAACCCGG
GAAGTCGCCA AGCAAGGCCA TACAGCGCCC GTGCATCAGT AA
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| Protein sequence | MRVLVLGSGV IGTASAYYLA RQGFEVTVVD RQPAVAMETS FANAGQISPG YASPWAAPGV
PLKAIKWLLE RHAPLAIKLT GDVDQYLWMA QMLRNCTASR YAVNKERMVR LSEYSRDCLD
ELRAETGIAY ESRTLGTTQL FRTQAQLDAA AKDIAVLEQS GVPYELLDRD GIARVEPALA
GVKDILAGAL RLPNDQTGDC QLFTTKLAEM ALKLGVEFRF GQDIQRLDFA GDRINGVWVD
GKLETADRYV LALGSYSPQM LKPLGIKAPV YPLKGYSLTV PITNADMAPT STILDETYKV
AITRFDNRIR VGGMAEIAGF DLSLNPRRRE TLEMIVNDLY PRGGDLSQAS FWTGLRPATP
DGTPIVGATA FRNLFLNTGH GTLGWTMACG SGRLLADLIA RKKPQISAEG LDISRYGKTR
EVAKQGHTAP VHQ
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