| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0170 |
|---|
| Symbol | |
|---|
| ID | 6108949 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 174748 |
|---|
| End bp | 175128 |
|---|
| Gene Length | 381 bp |
|---|
| Protein Length | 126 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641619926 |
|---|
| Product | endoribonuclease L-PSP |
|---|
| Protein accession | YP_001747045 |
|---|
| Protein GI | 170719357 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0281593 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGA CCGTCATCAA CAGCGACAAG GCCCCTGCCG CCATCGGTAC CTACTCGCAA
GCGATCAAGG CCGGCAACAC CGTTTACATG TCGGGCCAGA TCCCGCTGGA CCCGAACACC
ATGGAACTGG TTGAGGGCTT CGAAGCCCAG ACCGTACAGG TCTTCGAGAA CCTCAAGGCC
GTTGCCGAAG CCGCGGGCGG TTCGTTCAAG GACATCGTCA AGCTGAACAT CTTCCTCACC
GACCTGAGCC ACTTCGCCAA GGTCAACGAA GTCATGGGCC GCTACTTCGA GCAGCCGTAT
CCAGCCCGTG CAGCCATTGG CGTTGCCGCG CTGCCAAAAG GCGCCCAGGT AGAAATGGAC
GCCATCCTGG TCATCGATTG A
|
|---|
| Protein sequence | MSKTVINSDK APAAIGTYSQ AIKAGNTVYM SGQIPLDPNT MELVEGFEAQ TVQVFENLKA
VAEAAGGSFK DIVKLNIFLT DLSHFAKVNE VMGRYFEQPY PARAAIGVAA LPKGAQVEMD
AILVID
|
|---|
| |