| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0043 |
|---|
| Symbol | |
|---|
| ID | 6109213 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 47123 |
|---|
| End bp | 48028 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641619799 |
|---|
| Product | cation diffusion facilitator family transporter |
|---|
| Protein accession | YP_001746918 |
|---|
| Protein GI | 170719230 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1230] Co/Zn/Cd efflux system component |
|---|
| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.381731 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.307096 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGTTCAA ATCATGACCA TGGCAGCGCT GCAGTACGCG AGGGGCATCA GAAGAAGCTA
ATCATGGCGC TCGGCTTGAC TGGCAGCTTC ATGATTGCAG AAGTGATCGG TGCGTGGATT
ACCGGCAGCC TGGCGCTGCT GTCGGACGCA TCTCACATGT TCACAGATAC TGCCGCCTTG
GCGATCTCAC TGATTGCACT TCAGATAGCC AAGCGGCCGG CGGATCAGAA AAGAACCTTC
GGCTATGCGC GCCTGGAAAT TCTGGCTTCG ACGTTCAACG CCGTGCTGCT CTTCCTGGTG
GCGATGTACA TCTTGTATGA GGCCTACCAG CGCTTCTTCA TGCCGGCGGA GATCGCTACC
GGAGCGATGA TGTGGATCGC AATCGCCGGC CTGATCATCA ACCTAATTTC GATGCGCCTT
CTGGCATCTG CGAGCAACGA AAGCCTCAAC GTCAAAGGAG CCTACCTCGA AGTTTGGAGC
GACATGCTCG GCTCGCTTGG CGTAATCATC GCGGCACTTA TCATCCGCTT CACCGGCTGG
ACCTGGGTCG ACACGATTGT CGCTGTGGCG ATCGGCCTTT GGGTTCTGCC GCGGACGTGG
CAGTTGCTTC GCGAAAGCCT GGGGATCCTC ATGGAGGGTG TCCCGAGGGG GCTCGACGTT
ACGGCAATCG AGGCCACCAT CCTCGGAGTA GATGGCGTGA CGGACGTTCA TGACTTGCAC
GTGTGGGCTG TCAGCAGTGG CAGTAACGTG ATGACGTCGC ACGTAGTGGT TCGGGATTCT
GCAGATGGGG ATGCTGTGTT GGCGGCCGTC GTGGATGCTG TCAGCGATGC ATTCGAAATC
CATCACTGCA CCATCCAGAT CGAGCGGGCA GCTTTCCACG AGAGCGTTCC CTCACCCTCG
CACTGA
|
|---|
| Protein sequence | MGSNHDHGSA AVREGHQKKL IMALGLTGSF MIAEVIGAWI TGSLALLSDA SHMFTDTAAL
AISLIALQIA KRPADQKRTF GYARLEILAS TFNAVLLFLV AMYILYEAYQ RFFMPAEIAT
GAMMWIAIAG LIINLISMRL LASASNESLN VKGAYLEVWS DMLGSLGVII AALIIRFTGW
TWVDTIVAVA IGLWVLPRTW QLLRESLGIL MEGVPRGLDV TAIEATILGV DGVTDVHDLH
VWAVSSGSNV MTSHVVVRDS ADGDAVLAAV VDAVSDAFEI HHCTIQIERA AFHESVPSPS
H
|
|---|
| |