Gene PputGB1_5437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5437 
Symbol 
ID5873252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp6068861 
End bp6069730 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content59% 
IMG OID641550573 
ProductF0F1 ATP synthase subunit A 
Protein accessionYP_001671654 
Protein GI167036423 
COG category[C] Energy production and conversion 
COG ID[COG0356] F0F1-type ATP synthase, subunit a 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCAG AAACCGCTTC GGGCTATATC CAGCACCACT TGCAGAACCT GACCTACGGT 
CAACTACCAG ACGGCAGCTG GGGCTTCGCC CATTCGGCTG CAGAAGCCAA GGCAATGGGC
TTCTGGGCGT TCCACCTGGA CACCCTGGGT TGGTCCGTCG CGCTGGGTCT GATCTTCCTG
TTCATCTTCC GCATGGCGGC CAAGAAGGCG ACTTCCGGCC AGCCTGGCGG CCTGCAGAAC
TTCGTTGAAG TGATGGTGGA CTTCGTCAAC GGCAGCGTGA AGGACTCCTT CCACGGCCGT
AGCCCGGTGA TTGCACCGCT GGCGCTGACC ATTTTCGTCT GGGTATTCCT GATGAACGCC
GTCGACCTGG TACCGGTCGA CTGGATTCCT CAGCTGGCCA TCCTGATCTC CGGTGACCCG
CACATTCCGT TCCGCGCCGT GTCGACCACC GACCCGAACG CGACCCTGGC CATGGCCTTC
TGCGTGTTCG CCCTGATCAT CTTCTACAGC ATCAAGGTCA AGGGCCTGGG CGGCTTCATC
GGTGAGCTGA CCCTGCACCC GTTCGGCAGC AAGAACATCT TCGTGCAGAT CCTGCTGATT
CCGGTCAACT TCCTGCTGGA ATTCGTCACC CTGATCGCCA AGCCGATCTC GCTGGCACTG
CGTCTGTTCG GCAACATGTA TGCCGGCGAG CTGGTGTTCA TCCTGATCGC TGTAATGTTC
GGCTCCGGCC TGCTGTGGCT CAGCGGCCTG GGTGTGGTGC TGCAATGGGC GTGGGCTGTG
TTCCACATCC TGATCATCAC CCTGCAAGCT TTCATCTTCA TGATGCTGAC CATCGTCTAC
CTGTCGATGG CCCACGAAGA TAACCATTAA
 
Protein sequence
MAAETASGYI QHHLQNLTYG QLPDGSWGFA HSAAEAKAMG FWAFHLDTLG WSVALGLIFL 
FIFRMAAKKA TSGQPGGLQN FVEVMVDFVN GSVKDSFHGR SPVIAPLALT IFVWVFLMNA
VDLVPVDWIP QLAILISGDP HIPFRAVSTT DPNATLAMAF CVFALIIFYS IKVKGLGGFI
GELTLHPFGS KNIFVQILLI PVNFLLEFVT LIAKPISLAL RLFGNMYAGE LVFILIAVMF
GSGLLWLSGL GVVLQWAWAV FHILIITLQA FIFMMLTIVY LSMAHEDNH