Gene PputGB1_5413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5413 
Symbol 
ID5873228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp6041816 
End bp6042343 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content59% 
IMG OID641550549 
Producthypothetical protein 
Protein accessionYP_001671630 
Protein GI167036399 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.911887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.141138 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTC GTCTGCCACT GTTGGCGTTG GCCCTAGCAA TGAGCAGCCC GCTGGTGCAT 
GCCCAGATGC TGCAACCCGG TTTGTGGGAG CTGACCACCA GCAACATGCA GGTCGATGGC
AAGCCGCTAC CCGACATGGA ATTCATGCTC GGCCAGTTAA AAAACCTGCC GCCAGAGCAG
CGCGCAATGA TGGAAGGGGT GTTGGCCAAA CAGGGAGTAA GCGTAGGCGG TAAGGGTGTA
CGTTCGTGCC TGACGCCAGA ACAGGTGGCA ACCAACGACA TCCCGCTGCA GGACCCGAAG
TCAGGTTGCA CGCAGAAGAT CACTGACCGC ACCGGTAATG TGTGGAAGTT TCAGTTCAGC
TGCCCGAAGG CCCAGGGGAG TGGCCAGGCT ACATTCCTCA GTGATCGGGA ATTCACTACC
CAGGTGAGCG GCACATTCAA CGCCTCGGGT GTGCAGCAGC AAGGCAGCAT GAACACCCGT
GCGGTGTGGC TGGGCAATGA CTGCGGCACG GTCAAACCGC GCAGCTGA
 
Protein sequence
MKIRLPLLAL ALAMSSPLVH AQMLQPGLWE LTTSNMQVDG KPLPDMEFML GQLKNLPPEQ 
RAMMEGVLAK QGVSVGGKGV RSCLTPEQVA TNDIPLQDPK SGCTQKITDR TGNVWKFQFS
CPKAQGSGQA TFLSDREFTT QVSGTFNASG VQQQGSMNTR AVWLGNDCGT VKPRS