Gene PputGB1_5382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5382 
Symbol 
ID5873197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp6010251 
End bp6010784 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content61% 
IMG OID641550518 
Producthypothetical protein 
Protein accessionYP_001671599 
Protein GI167036368 
COG category[S] Function unknown 
COG ID[COG3495] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.246443 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCCT TTTTCCTTGT CCCCCTGCTG TTGGCCAGCG CCCTGGCCCA TGCTGAACTG 
CCTGAAACCG ACTGGCTGGA GCTGATGCCC AAGTCGGACC AGAAGGCGCT CGAGCAAATG
CCCGAAATCG ACCACAACTC GCCAGAAGCC ATGGGCACCT TTACCGACAA GGGTGGCCTC
AAGCAGAGCA AGGGCTTGCC GGCGGTGATG TACTCGACCA AGACCGTGGC GGCCATGAAC
GGCAAAGACA TCCGCTTGGG CGGTTACCCG GTGCCGCTGG AAAGCGATGC CAAGGGCAAC
AGCACGCTGT TTTTCCTGGT GCCGTACCCA GGTGCATGCA TCCATGTGCC GCCACCGCCG
CCGAACCAGT TGGTGCTGGT GCGCTACCCG AAAGGGTTGA AGATCGATGA CATCTACACA
CCGCTGTGGG TCAGCGGCAA GCTGAAGGTG GAAAAGGTCA GCAACGACCT GGCCGATGCG
GCCTATGCAC TGGATGCGGG GAAGGTGAGG GTGGTGGAAG ACGCAGACCT CTGA
 
Protein sequence
MRAFFLVPLL LASALAHAEL PETDWLELMP KSDQKALEQM PEIDHNSPEA MGTFTDKGGL 
KQSKGLPAVM YSTKTVAAMN GKDIRLGGYP VPLESDAKGN STLFFLVPYP GACIHVPPPP
PNQLVLVRYP KGLKIDDIYT PLWVSGKLKV EKVSNDLADA AYALDAGKVR VVEDADL