| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5371 |
|---|
| Symbol | |
|---|
| ID | 5873186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 5994415 |
|---|
| End bp | 5995305 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641550507 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_001671588 |
|---|
| Protein GI | 167036357 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.40701 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAAG TGAATGTGCT GGTCGTGGAT GACGCCCCGT TTATCCGTGA CCTGGTCCGC
AAGTGCCTGC GCAATGCCTT CCCGGGCATG GCCATCGACG ACGCGGTCAA TGGTCGCAAG
GCCATGGCCA TGCTCGGCAA GGAAGCGTTC GACCTGGTCC TGTGCGACTG GGAAATGCCG
GAAATGTCCG GCCTGGAGCT GCTCACCTGG TGCCGCCAGC AGCCTGCGCT GAAGCACCTT
CAGTTCATCA TGGTGACCAG CCGTGGCGAC AAGGAAAATG TCATTCAGGC GATCCAGGCG
GGCGTTTCCG ACTTTGTCGG CAAGCCGTTC ACCAACGAAC AACTGCTGAC CAAGGTGAAA
AAAGCCCTGA CCAAGATCGG CAAGCTCGAC AGCCTGATGG CTATTGGCCC GGCGCGTACC
AATTCGGCGT TCGCGAACGA TTCGTTGAAC GCGCTGACCG CCGGCAAGCC GGAAGCGGTC
AAGGTTTCGG CGCCTGCGCC AGCACCGGCT AAGCCTCTGG TCACGGCGCC CGCACCTGCT
GCCTCCGCGC CGAGCGGCCG TGGTCAGGGC CAGCTGCGCC TGGCCAGTGG CATGCAGCCG
TGCGTGATCA AGGCGCTTAG CCTGAAAGAA GCGCTGCTGG TGGTACGCCG CAGCGAAGCG
CTGCCACAGG TGCTCGAAGG TGCGGTGCTG GACCTGGAGC AGGGCGAAAG CGCCGAAGTC
GCTCGCCTGA ACGGTTACCT GCATGCTGTC GCGGCGCTGG AGCCCAAGCC TGACAGTGAC
TGGCTGCAGT TGACGTTCAA GTTCGTCGAC CAGGATGCCC AGAAGCTCGA CTACCTGTCG
CGGCTGATTG CCCGAGGGAC TGCGCAGAAG CACTTCACCC CCGGCGCCTG A
|
|---|
| Protein sequence | MSKVNVLVVD DAPFIRDLVR KCLRNAFPGM AIDDAVNGRK AMAMLGKEAF DLVLCDWEMP
EMSGLELLTW CRQQPALKHL QFIMVTSRGD KENVIQAIQA GVSDFVGKPF TNEQLLTKVK
KALTKIGKLD SLMAIGPART NSAFANDSLN ALTAGKPEAV KVSAPAPAPA KPLVTAPAPA
ASAPSGRGQG QLRLASGMQP CVIKALSLKE ALLVVRRSEA LPQVLEGAVL DLEQGESAEV
ARLNGYLHAV AALEPKPDSD WLQLTFKFVD QDAQKLDYLS RLIARGTAQK HFTPGA
|
|---|
| |