| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5359 |
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| Symbol | |
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| ID | 5873174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5983779 |
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| End bp | 5985182 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641550495 |
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| Product | putative signal transduction protein |
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| Protein accession | YP_001671576 |
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| Protein GI | 167036345 |
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| COG category | [S] Function unknown
[T] Signal transduction mechanisms |
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| COG ID | [COG1639] Predicted signal transduction protein
[COG2606] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.42347 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAG TTGCCCTGGA CACCGCAACC CCACACGCCC CCTCTGTCAT CAGGCTGCTG
CTCGACAAAC TCGGCGTGGC CTACCGCGAG GTGGTCGAAC ACCCGCAGCT GCCTGCGGCT
TCGCGGGTGC AGGCGGTGCT TCTCGACGAC GAGGTCGGCG CCCTCATGGT GCTGTTCCCG
CAGAGCCAAC TGCTGGACCT CAACCGCCTG GCCGAGCTGA CCGGGCGCAA GCTCACCGCT
GTGTCGGTGC CGCGACTGAA GCAGATGCTC GACAAGCACC AGCTCAAGGC CTTGCCGGGT
ATCCCGGCGC TGACCAGCTC GCCGTGCCAG TACGAAAAGA GCCTGCTCGA CGCCGAGACC
GTCTATATCC AGTCGGGCGA AGCCGGCCTG CTGCTGGAAA TCGAACGCGC GAACTTCAAG
CGTATGCTGG CCAAAGCCAG CGCCAGCAAC TTCGGTCAGG AAGTCGAGGC CATCAGCCCC
AACCTCGACC GCCCCGATGA CGACACCCGG GAAATCACCA ATGCCGTCCA GGCCTTCACT
GCCCGACGCA TTCAGAAGCG CCTGGAAGAA ACCATCGAAA TCCCACCGCT GGCCGACACC
GCGCAAAAAA TCATCAAGCT ACGGGTAGAC CCCAACGCCA GTATCGATGA CATCACGGGC
GTGGTCGAAA CAGACCCGGC GCTGGCAGCG CAAGTGGTGA GCTGGGCCGC GTCGCCCTAT
TACGCCTCGC CGGGCAAGAT CCGCTCGGTG GAAGACGCCA TTGTCCGCGT GCTGGGCTTC
GACCTGGTGA TCAATCTGGC CCTTGGCCTG GCACTGGGCA AAACCTTGAG CCTGCCAAAA
GACCACCCAC AGCAGGCAAC GCCCTATTGG CAGCAGTCGA TCTACACCGC TGCAATCATC
GAAGGCCTGA CCCGCGCCAT GCCTCGGGCA GAGCGCCCCG AAGCCGGGCT CACCTACCTG
GCCGGGCTGC TGCACAACTT TGGCTACTTG CTGCTGGCGC ATGTGTTCCC GCCGCACTTC
TCGCTGATCT GCCGCCACCT GGAGGTCAAC CCGCACCTGA ACCACACCTA CGTGGAGCAG
CACCTGCTGG GCATCAGCCG CGAGCAGATC GGGGCCTGGC TGATGAAGCT GTGGGACATG
CCCGAAGAGC TGTCGACCGC CCTGCGCTTC CAGCACGACC CGGCCTATGA CGGCGAGTAC
TCGGCGTTCC CCAACCTGGT GTGCCTGGCC ACTCGCCTGC TGCGCTCACG GGGGATCGGC
ACTGGGCCGC AGGAAGAGAT CCCTGACGAG CTACTGGAGC GTTTGGGGAT TACCCGGGAC
AAGGCCGAGG ATGTGGTGAA CAAGGTGCTC GAGGCCGAGA ACCTGTTGCG AGAACTGGCT
TCGCAGTTCC ACGCACCGCA TTGA
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| Protein sequence | MTEVALDTAT PHAPSVIRLL LDKLGVAYRE VVEHPQLPAA SRVQAVLLDD EVGALMVLFP
QSQLLDLNRL AELTGRKLTA VSVPRLKQML DKHQLKALPG IPALTSSPCQ YEKSLLDAET
VYIQSGEAGL LLEIERANFK RMLAKASASN FGQEVEAISP NLDRPDDDTR EITNAVQAFT
ARRIQKRLEE TIEIPPLADT AQKIIKLRVD PNASIDDITG VVETDPALAA QVVSWAASPY
YASPGKIRSV EDAIVRVLGF DLVINLALGL ALGKTLSLPK DHPQQATPYW QQSIYTAAII
EGLTRAMPRA ERPEAGLTYL AGLLHNFGYL LLAHVFPPHF SLICRHLEVN PHLNHTYVEQ
HLLGISREQI GAWLMKLWDM PEELSTALRF QHDPAYDGEY SAFPNLVCLA TRLLRSRGIG
TGPQEEIPDE LLERLGITRD KAEDVVNKVL EAENLLRELA SQFHAPH
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