| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5351 |
|---|
| Symbol | |
|---|
| ID | 5873166 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 5976084 |
|---|
| End bp | 5976464 |
|---|
| Gene Length | 381 bp |
|---|
| Protein Length | 126 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641550487 |
|---|
| Product | endoribonuclease L-PSP |
|---|
| Protein accession | YP_001671568 |
|---|
| Protein GI | 167036337 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.120193 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.233615 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGA CCGTCATCAC CAGCGACAAG GCCCCAGCCG CCATCGGTAC CTACTCGCAA
GCGATCAAGG CCGGCAACAC CGTGTACATG TCGGGCCAGA TCCCGCTGGA CCCGAAGACC
ATGGAACTGG TCGAAGGCTT CGAAGCCCAG ACCGTGCAAG TGTTCGAGAA CCTCAAGGCC
GTGGCTGAAG CCGCTGGTGG TTCGTTCAAG GACATCGTCA AGCTGAACAT CTTCCTCACC
GACCTGAGCC ACTTCGCCAA GGTCAACGAG GTGATGGGCC GCTACTTCGA ACAGCCCTAC
CCAGCCCGCG CCGCCATCGG CGTAGCCGCG CTGCCGAAAG GCTCCCAGGT CGAAATGGAC
GCCATCCTGG TCATCGAATG A
|
|---|
| Protein sequence | MSKTVITSDK APAAIGTYSQ AIKAGNTVYM SGQIPLDPKT MELVEGFEAQ TVQVFENLKA
VAEAAGGSFK DIVKLNIFLT DLSHFAKVNE VMGRYFEQPY PARAAIGVAA LPKGSQVEMD
AILVIE
|
|---|
| |