| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5347 |
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| Symbol | |
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| ID | 5873162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5970928 |
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| End bp | 5972310 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641550483 |
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| Product | glutamate--putrescine ligase |
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| Protein accession | YP_001671564 |
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| Protein GI | 167036333 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0174] Glutamine synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.107252 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCGG TAACCCCGTG CGCCAGTTCT TCCAGCGAGA TGAATGACTT CCTCCAGGCC
CATCCGGACA CGCAGTATGT AGACCTGCTG ATCTCCGACA TGAATGGCGT GGTACGTGGC
AAGCGCATCG AGCGGGCCAG CCTGCACAAG GTGTACGAGA AGGGCATCAA CCTGCCGGCT
TCGCTGTTCG CCCTGGACAT CAACGGCTCC ACGGTCGAGA GCACCGGCCT TGGCCTGGAC
ATCGGCGATG CCGACCGCAT CTGCTTCCCG ATCCCCGGCA CGCTGTCGGA CGAACCCTGG
CAGAAGCGCC CCACCGCGCA GCTGCTGATG ACCATGCACG AACTGGATGG CCAGCCGTTC
TTCGCCGACC CGCGTGAAGT GCTGCGCCAG GTGGTGAGCA AGTTCGACGA CCTGGGCCTG
GATATCTGCG CGGCGTTCGA GCTGGAGTTC TACCTGATTG ACCAGGACAA CCTCAACGGT
CGCCCACAGC CGCCGCGCTC ACCGATTTCC GGCAAGCGCC CGCAGTCAAC CCAGGTGTAC
CTGATCGACG ACCTCGACGA ATACGCCGAC TGCCTGCAGG ACATGCTCGA AGCAGCCAAG
GAACAAGGCC TGCCCGCCGA CGCCATCGTC AAGGAAAGCG CCCCGGCGCA GTTCGAGGTC
AACCTGCACC ATGTGGCTGA TCCGCTGAAA GCGTGCGACT ACGCGATTCT GCTCAAGCGC
CTGATCAAGA ACGTGGCCTA CGACCATGAA ATGGACACCA CCTTCATGGC CAAGCCCTAC
CCAGGTCAGG CAGGCAATGG TCTGCACGTG CACATTTCGC TGCTGGACAA GAAAACCGGC
AAGAACATCT TCGCCAGTGA CGACCCGCTG CAAAGCGACA CGCTGCGCCA CGCCATTGGC
GGCGTGCTGG AAACCATGCC GGCGTCGATG GCCTTCCTGT GCCCGAACAT CAACTCCTAC
CGCCGCTTCG GTGCGCAGTT CTACGTGCCC AATGCGCCTA GCTGGGGCCT GGACAACCGC
ACCGTGGCAG TACGCGTGCC CACCGACAGC AGCGACAACG TGCGCCTGGA GCACCGTGTG
GCTGGCGCCG ACGCCAACCC GTACCTGATG CTCGCCGCGA TCCTTGCCGG TGTTCACCAC
GGCCTGACCA ACAAGGTCGA GCCCCAGGCG CCGATCGAAG GCAACTCCTA CGAACAGCTG
GAGCAAAGCC TGCCGAACAA CCTGCGCGAC GCTCTGCGCG CGCTGGATGA CAGCGAAGTT
CTCAACCAAT ACATCAGCCC GGACTACATC GATATCTTCG TGGCCTGCAA GGAAAGCGAA
CTGGCCGAGT TCGAAGTGTC GATTTCCGAC CTCGAGTACA ACTGGTACCT GCACACGGTG
TAA
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| Protein sequence | MTSVTPCASS SSEMNDFLQA HPDTQYVDLL ISDMNGVVRG KRIERASLHK VYEKGINLPA
SLFALDINGS TVESTGLGLD IGDADRICFP IPGTLSDEPW QKRPTAQLLM TMHELDGQPF
FADPREVLRQ VVSKFDDLGL DICAAFELEF YLIDQDNLNG RPQPPRSPIS GKRPQSTQVY
LIDDLDEYAD CLQDMLEAAK EQGLPADAIV KESAPAQFEV NLHHVADPLK ACDYAILLKR
LIKNVAYDHE MDTTFMAKPY PGQAGNGLHV HISLLDKKTG KNIFASDDPL QSDTLRHAIG
GVLETMPASM AFLCPNINSY RRFGAQFYVP NAPSWGLDNR TVAVRVPTDS SDNVRLEHRV
AGADANPYLM LAAILAGVHH GLTNKVEPQA PIEGNSYEQL EQSLPNNLRD ALRALDDSEV
LNQYISPDYI DIFVACKESE LAEFEVSISD LEYNWYLHTV
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