Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5290 |
Symbol | |
ID | 5873105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5909344 |
End bp | 5910054 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641550426 |
Product | hypothetical protein |
Protein accession | YP_001671507 |
Protein GI | 167036276 |
COG category | [S] Function unknown |
COG ID | [COG3159] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATC AGCCCAAGGT TGTACCCAAG CAGTCCACCG AACTCGATGC CGAAGCGGTG GTCGCCTACC TGCGCGCCCA CCCCACCTTC TTCGCCGAGC ACGACGAGCT GCTGATCGAA CAGCACATCC CGCACCAGCG TGGTGACAGC GTGTCGCTGG TGGAGCGCCA GCTCAAGCTG CTGCGTGACC GCAACATCGA AATGCGCCAT CGTCTGTCGC AACTGATGGA CGTGGCCCGC GACAACGACC GGCTGTTCGA CAAGACCCGC CGGCTGATCC TTGACCTGCT GGATGCCGGC AGCCTGGAAG ACGTGGTCAT GGCGGTCGAA GACAGCCTGC GCCAGGAGTT CCAGGTGCCC TTCGTCAGCT TGATCCTGTT CGGCGACAAC GTCGCGCCGG TCGGGCGCTG GGTCAGCAAC GCCGAGGCCC AGCAGGCCAT CGGCGCCCTG CTGGGCGGCG GCAAGACGGT CAGCGGCAAC CTGCGCGAGC ACGAGCTGGC CTTCCTGTTC GGCGAGGAAC AGCGCCGGGA AGTAGGCTCC AGTGCCGTGG CCACCCTTGA GTACCAGGGG CTGCATGGGG TGCTGGCCAT CGGCAGCCGC GACCCGCAAC ACTACAAGAG CAGCGTCGGC ACCCTGTTCC TCGGCTACAT CGCCGAAGTA CTCGGCCGCG TTGTGCCACG CGTTACCCAG ACCCTGCGCT CGGTACGCTG A
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Protein sequence | MTDQPKVVPK QSTELDAEAV VAYLRAHPTF FAEHDELLIE QHIPHQRGDS VSLVERQLKL LRDRNIEMRH RLSQLMDVAR DNDRLFDKTR RLILDLLDAG SLEDVVMAVE DSLRQEFQVP FVSLILFGDN VAPVGRWVSN AEAQQAIGAL LGGGKTVSGN LREHELAFLF GEEQRREVGS SAVATLEYQG LHGVLAIGSR DPQHYKSSVG TLFLGYIAEV LGRVVPRVTQ TLRSVR
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