Gene PputGB1_5290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5290 
Symbol 
ID5873105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5909344 
End bp5910054 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content66% 
IMG OID641550426 
Producthypothetical protein 
Protein accessionYP_001671507 
Protein GI167036276 
COG category[S] Function unknown 
COG ID[COG3159] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATC AGCCCAAGGT TGTACCCAAG CAGTCCACCG AACTCGATGC CGAAGCGGTG 
GTCGCCTACC TGCGCGCCCA CCCCACCTTC TTCGCCGAGC ACGACGAGCT GCTGATCGAA
CAGCACATCC CGCACCAGCG TGGTGACAGC GTGTCGCTGG TGGAGCGCCA GCTCAAGCTG
CTGCGTGACC GCAACATCGA AATGCGCCAT CGTCTGTCGC AACTGATGGA CGTGGCCCGC
GACAACGACC GGCTGTTCGA CAAGACCCGC CGGCTGATCC TTGACCTGCT GGATGCCGGC
AGCCTGGAAG ACGTGGTCAT GGCGGTCGAA GACAGCCTGC GCCAGGAGTT CCAGGTGCCC
TTCGTCAGCT TGATCCTGTT CGGCGACAAC GTCGCGCCGG TCGGGCGCTG GGTCAGCAAC
GCCGAGGCCC AGCAGGCCAT CGGCGCCCTG CTGGGCGGCG GCAAGACGGT CAGCGGCAAC
CTGCGCGAGC ACGAGCTGGC CTTCCTGTTC GGCGAGGAAC AGCGCCGGGA AGTAGGCTCC
AGTGCCGTGG CCACCCTTGA GTACCAGGGG CTGCATGGGG TGCTGGCCAT CGGCAGCCGC
GACCCGCAAC ACTACAAGAG CAGCGTCGGC ACCCTGTTCC TCGGCTACAT CGCCGAAGTA
CTCGGCCGCG TTGTGCCACG CGTTACCCAG ACCCTGCGCT CGGTACGCTG A
 
Protein sequence
MTDQPKVVPK QSTELDAEAV VAYLRAHPTF FAEHDELLIE QHIPHQRGDS VSLVERQLKL 
LRDRNIEMRH RLSQLMDVAR DNDRLFDKTR RLILDLLDAG SLEDVVMAVE DSLRQEFQVP
FVSLILFGDN VAPVGRWVSN AEAQQAIGAL LGGGKTVSGN LREHELAFLF GEEQRREVGS
SAVATLEYQG LHGVLAIGSR DPQHYKSSVG TLFLGYIAEV LGRVVPRVTQ TLRSVR