Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5225 |
Symbol | |
ID | 5873039 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5838096 |
End bp | 5838497 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641550361 |
Product | biopolymer transport protein ExbD/TolR |
Protein accession | YP_001671443 |
Protein GI | 167036212 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCTTTT CGACCCAGGA CAGCGACGAA GTCCTCAGTG AAATCAACGT CACGCCCCTG GTGGACGTCA TGCTGGTGCT GCTGGTGGTG TTCATCGTCA CCGCGCCGCT GCTGACCAAC GCCATTCCCA TCAACCTGCC CAAGACCGAG GCCGTGGCCC CGGTGGAGCA GAAGGACCCG CTGGTGGTCA GCATCGATGG CGAGGGCAAG CTGTTCATCA ACAAGGACCA GATCCAGCCC GATCTGCTGG AAACCAATCT CAAGGCCGCC AAGGACAAGG ACGCGGACGT GCGCGTGCAG CTGCAGGCCG ATGACGGCGT GAACTACGGC GAAGTGGCAC GGGCCATGGC GGCCATCGAA CGCGCGGGGA TCAGCAAGCT GGCGGTGATT ACCGCACGTT GA
|
Protein sequence | MAFSTQDSDE VLSEINVTPL VDVMLVLLVV FIVTAPLLTN AIPINLPKTE AVAPVEQKDP LVVSIDGEGK LFINKDQIQP DLLETNLKAA KDKDADVRVQ LQADDGVNYG EVARAMAAIE RAGISKLAVI TAR
|
| |