Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5214 |
Symbol | |
ID | 5873028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5827420 |
End bp | 5828346 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641550350 |
Product | lipase |
Protein accession | YP_001671432 |
Protein GI | 167036201 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGCTG CTTTTCAACC CGACCACCTG CGCACCTGCC TGGCACCGTT GACCGCTTGC CAGCCGTTAA CGGCCGAGGC CCAGGGATAC CAGCGCTTCT ACGGCCTGGA CCTGTCGGCA CACAGCTGGC TGGGCGGCTT CCAGGCGGCG GGGTTCGACC TGGTCGGGCA GGCCTGGTTA CCCGAGCAGC CCATCGCAAC GCTGTTCCTG TTGCACGGTT ATTACGACCA TATGGGCCTC TACCGGCATG TGATCGAATG GGCACTCAAA CAGGGTTTCG CTGTGATCAG CTGTGACCTG CCCGGTCATG GCCTGTCCAG TGGCGAGCGG GCCAGCATCA GTGATTTTGC GGTTTACCAG CAGGTGCTGG AGGTGTTGTT CGAACAGGCA CGGGCGCTGC AACTGCCGCG CCCGTGGCAC CTGTGCGGGC AGAGCACCGG TGGCGCCATT GCCGTGGACC ACCTGCTGCA CCAAGGCGCG CGCAGCCCCA TCGATGGCCA GGTCATCCTC TTGGCACCGT TGGTACGGCC CTGTTCCTGG CGCTGGTCGA AATTGAGTTA TCGGGTGTTG CGTCACTTTG TGAACGGCAT CGAGCGCCGC TTCAGCGAGA ACACCAACGA CCCGGCCTTC CTGCCGTTTC TGGAGGCCGA CCCGCTGCAA CCGCGCCGCC TGCCAACCGC CTGGGTGGGG GCACTGATCG CATGGGTCAA ACGCATAGAG GCCGCGCCAC GCAGTTCGCG GCGGCCGTTG ATCGTGCAGG GGGAGGCCGA TGGCACGGTG GATTGGCCCT ACAACCTTGA AGTGCTCAAG GCCAAGTTTG CCGAGCCGCA AATTCTGATG CTGCCCGAGG CCCGTCACCA CTTGGCCAAC GAGCTGCCGG GCATTCGCCA GCGCTACTTC GACTTCATCG ACCAGCGCCT GGGCTGA
|
Protein sequence | MPAAFQPDHL RTCLAPLTAC QPLTAEAQGY QRFYGLDLSA HSWLGGFQAA GFDLVGQAWL PEQPIATLFL LHGYYDHMGL YRHVIEWALK QGFAVISCDL PGHGLSSGER ASISDFAVYQ QVLEVLFEQA RALQLPRPWH LCGQSTGGAI AVDHLLHQGA RSPIDGQVIL LAPLVRPCSW RWSKLSYRVL RHFVNGIERR FSENTNDPAF LPFLEADPLQ PRRLPTAWVG ALIAWVKRIE AAPRSSRRPL IVQGEADGTV DWPYNLEVLK AKFAEPQILM LPEARHHLAN ELPGIRQRYF DFIDQRLG
|
| |