| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5200 |
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| Symbol | |
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| ID | 5873014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5814879 |
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| End bp | 5815535 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641550336 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001671418 |
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| Protein GI | 167036187 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0560] Phosphoserine phosphatase |
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| TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCCTGG CTTTATTCGA CCTGGACAAT ACCCTCCTCG GTGGCGACAG CGACCATGCC
TGGGGTGACT ACCTTTGCGA GCGTGGCATC CTCGACCCAC TCGCCTACAA GCAACGCAAC
GATGGTTTCT ACCAGGACTA CCTCAACGGC ACCCTGGACC TGCAGGCCTA CCTGGCCTTT
TCCATGGAGA TCCTGGCGGC AACGCCCGTG GCCCAGCTCG ACGAATGGCA CCGCGACTTC
ATGCGCGACT GCATCGAACC GATCATCCTG CCCAAGGCCC TGGCCCTGCT GCAGCAGCAC
CGCGAGGCGG GCGACCAGTT GGTGATCATT ACCGCTACCA ACCGCTTCGT CACCGCGCCA
ATTGCACGGC GTCTTGGCAT TCGCGTGCTG CTGGCAACCG AGTGCGAGAT GCGCGACGGT
CGCTATACCG GGCGTAGTAC CGATATACCG TGTTTCCGTG AAGGCAAGGT GACGCGGCTG
GAGCGGTGGA TGCTGGAGAA TGGCTTCGAC CTGGAGGACA GCTACTTCTA TAGCGACTCG
ATGAACGATT TGCCGCTGTT GCAGCAGGTG ACGCATGCAG TGGCGGTGGA CCCGGACCCG
AACCTGCGGG CCGAGGCCGA GAAGCATGGG TGGCCGGTGG TTTCGCTAAG GGATTGA
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| Protein sequence | MRLALFDLDN TLLGGDSDHA WGDYLCERGI LDPLAYKQRN DGFYQDYLNG TLDLQAYLAF
SMEILAATPV AQLDEWHRDF MRDCIEPIIL PKALALLQQH REAGDQLVII TATNRFVTAP
IARRLGIRVL LATECEMRDG RYTGRSTDIP CFREGKVTRL ERWMLENGFD LEDSYFYSDS
MNDLPLLQQV THAVAVDPDP NLRAEAEKHG WPVVSLRD
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