| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5125 |
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| Symbol | gltD |
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| ID | 5872940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5732563 |
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| End bp | 5733981 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641550263 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_001671345 |
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| Protein GI | 167036114 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAC GTCTGAACAA CGACTTCCAG TTCATCGAAG TGGGCCGCAA GGACCCGAAG
AAAAAGCTGC TGCGCCAGCG CAAGAAGGAG TTCGTGGAAA TCTACGAGCC GTTCAAGCCG
CAGCAGTCCG TGGAGCAGGC ACACCGCTGC CTGGGCTGCG GTAACCCGTA TTGCGAGTGG
AAGTGCCCGG TGCACAACTT CATCCCCAAC TGGTTGAAGC TGGTTTCCGA AGGCAACATC
CTGGCTGCGG CGGAACTGTC GCACCAGACC AACACCCTGC CTGAAGTGTG CGGCCGCGTG
TGCCCGCAAG ACCGCCTGTG CGAGGGGGCC TGCACCCTGA ACGATGGCTT CGGCGCAGTG
ACCATCGGTT CTGTGGAGAA GTACATCACC GACACCGCTT TCGCCATGGG CTGGCGCCCG
GACATGTCCA AGGTCAAGCC AACCGGCAAG CGCGTCGCCA TCATCGGCGC CGGCCCGGCC
GGCCTGGGTT GTGCTGACGT GCTGGTGCGC GCTGGCGTAA CCCCGGTGGT GTTCGACAAG
AACCCGGAAA TCGGCGGCTT GCTGACCTTT GGCATCCCCG AGTTCAAGCT GGAAAAGACC
GTGCTCAGCA ACCGCCGCGA AGTGTTCACC GGCATGGGTA TCGAGTTCCG CCTGAACACC
GAGGTGGGCA AGGACGTGAC CATGGAGCAG CTGCTCGCCG AGTACGACGC GGTGTTCATG
GGCATGGGTA CTTACACCTA CATGAAGGGC GGCTTCCCGG GCGAAGACCT GCCGGGCGTG
CATGACGCAC TGGACTTCCT GATTGCCAAC GTCAACCGCA ACCTGGGCTT CGAGAAGTCG
CCGGAAGACT TCGTCGACAT GCAGGGCAAA AAGGTCGTGG TGCTGGGCGG TGGTGACACC
GCGATGGACT GCAACCGCAC CTCGATCCGC CAGGGTGCCA AGGCAGTGAC CTGTGCCTAT
CGCCGTGACG AAGCCAACAT GCCGGGTTCG CGCAAAGAGG TGAAGAACGC CAAGGAAGAG
GGCGTGAAGT TCCTCTATAA CCGTCAGCCA ATCGCCATTG TCGGCGAGGA CAAGGTCGAA
GGCGTGAAAG TGGTCGAGAC CCGCCTGGGT GAGCCGGATG CCCGTGGCCG CCGCAGCCCC
GAGCCGATCC CGGGCTCCGA AGAGATCCTG CCGGCCGATG CCGTGGTGAT CGCCTTCGGC
TTCCGCCCGA GCCCGGCGCC GTGGTTCGAG CAGCATGGCA TTCAGCTGGA CAGTCAGGGC
CGTGTCGTGG CACCGGAGAA AGGCAAGTTC AAGCACCAGA CCAGCAACCC GAAAGTGTTT
GCCGGTGGCG ACATGGTGCG TGGTTCGGAC TTGGTAGTGA CGGCTATTTT CGAAGGGCGT
ACAGCTGCCG AAGGCATTCT GGACTACCTC GAGGTCTGA
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| Protein sequence | MAERLNNDFQ FIEVGRKDPK KKLLRQRKKE FVEIYEPFKP QQSVEQAHRC LGCGNPYCEW
KCPVHNFIPN WLKLVSEGNI LAAAELSHQT NTLPEVCGRV CPQDRLCEGA CTLNDGFGAV
TIGSVEKYIT DTAFAMGWRP DMSKVKPTGK RVAIIGAGPA GLGCADVLVR AGVTPVVFDK
NPEIGGLLTF GIPEFKLEKT VLSNRREVFT GMGIEFRLNT EVGKDVTMEQ LLAEYDAVFM
GMGTYTYMKG GFPGEDLPGV HDALDFLIAN VNRNLGFEKS PEDFVDMQGK KVVVLGGGDT
AMDCNRTSIR QGAKAVTCAY RRDEANMPGS RKEVKNAKEE GVKFLYNRQP IAIVGEDKVE
GVKVVETRLG EPDARGRRSP EPIPGSEEIL PADAVVIAFG FRPSPAPWFE QHGIQLDSQG
RVVAPEKGKF KHQTSNPKVF AGGDMVRGSD LVVTAIFEGR TAAEGILDYL EV
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