| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5075 |
|---|
| Symbol | |
|---|
| ID | 5872890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 5667852 |
|---|
| End bp | 5670425 |
|---|
| Gene Length | 2574 bp |
|---|
| Protein Length | 857 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641550213 |
|---|
| Product | glucosyltransferase MdoH |
|---|
| Protein accession | YP_001671295 |
|---|
| Protein GI | 167036064 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2943] Membrane glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAACT CAAACGCAAG GCCAGTATCG CTTGGCGAGT ACCTGGCTCA CCTGCCACTG
AGTGACGAGC AACGGGCGGA ACTCGCCAGT TGCTCGTCGT TCAGTGAGCT GCACCAACGT
CTGGCGGCCG ACCCGGCCGC CGGCCCTGCC GAGGCCGTAC AGGCCTCGGT CGGTCCACGT
TTGACCGTGG GCAGTGCTGC CGAGCTGGAA GATGCCGAAA TGCTCGGTGT CGATGGCAGC
GGCCGCCTGT GCCTGAAGAT CGCCCCGCCG ATCAAACGCA CCAAGGTCGT GCCCGAGCCG
TGGCGCACCA ACGTGCTGAT CCGCATGTGG CGGCGCATGA CCGGCCGTCC CAACGCGCCG
CAGCCACCCA AGCGCGAGCT GCCGCCGGCA CGCTGGCGCA CGGTCGGGTC GATCCGCCGT
TACATCCTGC TGGCCCTGAT GATCGGCCAG ACCATCGTCG CCGGTTGGTA CATGAAGGGC
ATCCTGCCGT ACCAGGGCTG GTCGTTCGTC GACCTCGACG AAATCCTCAG TCAGTCGCTG
TGGGACACCG TCGTGCAGGT GTGGCCGTAT GCCTTGCAAA CCTCCATCCT GATCCTCTTC
GGCATCCTGT TCTGCTGGGT ATCGGCGGGC TTCTGGACCG CACTGATGGG CTTCCTCGAG
CTGCTCACCG GGCGCGACAA ATACAAGATT TCGGGCAGTA GCGCCGGCAA CGAGCCGATT
GCACCCGAGG CGCGTACCGC GTTGGTGATG CCGATCTGCA ACGAAGACGT GCCGCGCGTG
TTCGCCGGCC TGCGCGCAAC GTTCGAGTCG GTGGCCGCCA GCGGCAACCT CGACCGCTTC
GACTTCTTCG TGCTCAGCGA CACCAACGAC ACCGACATTG CCGTGGCGGA GCAACAGGCC
TGGCTGGACG TGTGCCGCGA AACCAAAGGC TTTGGCCGCA TCTTCTACCG CCGCCGTCGG
CGCCGGGTGA AGCGCAAGAG CGGCAACCTC GACGACTTCT GCCGTCGCTG GGGTGGCGAG
TACAAGTACA TGGTCGTGCT CGACGCCGAC AGCGTCATGA GCGGCGAGTG CCTGAGCAGC
CTGGTGCGCC TGATGGAGGC CAACCCGGAC GCCGGCATCA TCCAGACCGG GCCAAAAGCC
TCGGGCATGG ACACCCTGTA TGCACGCATG CAGCAGTTCG CCACCCGCGT GTACGGCCCG
CTGTTCACCG CTGGCCTGCA CTTCTGGCAG CTGGGCGAGT CGCACTACTG GGGCCACAAC
GCGATCATCC GCATGAAGCC GTTCATCGAG CACTGCGCCC TGGCGCCGTT GCCGGGTAAG
GGCGCGTTCG CCGGTGCCAT CCTTTCCCAC GACTTCGTCG AAGCCGCGCT GATGCGCCGC
GCCGGCTGGG GCGTGTGGAT CGCCTACGAC CTGCCGGGCA GCTACGAAGA ACTGCCGCCG
AACCTGCTCG ACGAGCTCAA GCGCGACCGC CGCTGGTGCC ACGGCAACCT GATGAACTTC
CGCCTGTTCC TGGTCAAGGG CATGCACCCG GTACACCGTG CGGTGTTCCT CACCGGGGTC
ATGTCGTACC TGTCGGCACC GTTGTGGTTC CTGTTCCTGG TGCTGTCGAC TGCGCTGCTG
GCGACCAACA CGCTGATGGA GCCGCAGTAT TTCATCGAGC CGTACCAGCT TTACCCGCTG
TGGCCGCAGT GGCACCCGGA AAAGGCCGTG GCGCTGTTCT CCACCACCAT CGTGCTGCTG
TTCCTGCCCA AGCTGCTCAG TGTCATCCTG ATCTGGGCCA AGGGCGCCGT CGAGTTCGGC
GGGCGGATCA AGGTTACCTT GTCGATGCTG ATGGAGATGC TGTTCTCCAT GCTGCTGGCA
CCGGTACGCA TGATCTTCCA CACCCGCTTC GTGCTGGCCG CGTTCCTCGG CTGGGCCGCG
ACCTGGAACT CGCCGCAGCG TGACGACGAC TCCACGCCGT GGAGCGAAGC GGTGCGTCGC
CACGGCCCAC AAACACTGCT GGGTATTGCC TGGGCCGCGC TGGTGGCGTG GTTGAACCCA
AGCTTCCTGT GGTGGCTGGC GCCTATCGTC GGTTCGCTGG TGCTGTCGAT CCCGGTGTCG
GTAATTTCCA GCCGCACCCG CCTGGGCCTG GCGGCCAAGG ATGAGAAGCT GTTCCTCATC
CCCGAGGAAT ACGCCACCCC GCAAGAGCTG CTGGCTACCG ACCAGTACAC CCACGAAAAC
CGCTGGCATG CCCTGCATGA TGGCTTCGTG CGGGCAGTGG TCGACCCGCG GCAGAACGCC
CTGGCCTGCG CCATGGCCAC TGCCCGTCAC GGCCAGGCGG CGCCGATCGA AGCACTGCGT
GCCGAGCGCG TGGCCAAGGC GATGGAGGTC GGGCCGAAAG GGCTGGACCT CAATACCCGT
CTGGCTCTGC TCAGTGACCC CGTGGCGCTG ACTCGCCTGC ATGAGCAAGT GTGGGCCGAG
CACAATGCGG CGTGGATCGA TGTGTGGCGT GCTTCCATCA AAAACGACCC GCACTCGCCG
CTGTTGCCGT TGCATCCGGA GAGTGAAGGC CAACCAGTAC TCGCCGGCGC CTGA
|
|---|
| Protein sequence | MSNSNARPVS LGEYLAHLPL SDEQRAELAS CSSFSELHQR LAADPAAGPA EAVQASVGPR
LTVGSAAELE DAEMLGVDGS GRLCLKIAPP IKRTKVVPEP WRTNVLIRMW RRMTGRPNAP
QPPKRELPPA RWRTVGSIRR YILLALMIGQ TIVAGWYMKG ILPYQGWSFV DLDEILSQSL
WDTVVQVWPY ALQTSILILF GILFCWVSAG FWTALMGFLE LLTGRDKYKI SGSSAGNEPI
APEARTALVM PICNEDVPRV FAGLRATFES VAASGNLDRF DFFVLSDTND TDIAVAEQQA
WLDVCRETKG FGRIFYRRRR RRVKRKSGNL DDFCRRWGGE YKYMVVLDAD SVMSGECLSS
LVRLMEANPD AGIIQTGPKA SGMDTLYARM QQFATRVYGP LFTAGLHFWQ LGESHYWGHN
AIIRMKPFIE HCALAPLPGK GAFAGAILSH DFVEAALMRR AGWGVWIAYD LPGSYEELPP
NLLDELKRDR RWCHGNLMNF RLFLVKGMHP VHRAVFLTGV MSYLSAPLWF LFLVLSTALL
ATNTLMEPQY FIEPYQLYPL WPQWHPEKAV ALFSTTIVLL FLPKLLSVIL IWAKGAVEFG
GRIKVTLSML MEMLFSMLLA PVRMIFHTRF VLAAFLGWAA TWNSPQRDDD STPWSEAVRR
HGPQTLLGIA WAALVAWLNP SFLWWLAPIV GSLVLSIPVS VISSRTRLGL AAKDEKLFLI
PEEYATPQEL LATDQYTHEN RWHALHDGFV RAVVDPRQNA LACAMATARH GQAAPIEALR
AERVAKAMEV GPKGLDLNTR LALLSDPVAL TRLHEQVWAE HNAAWIDVWR ASIKNDPHSP
LLPLHPESEG QPVLAGA
|
|---|
| |