| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5069 |
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| Symbol | |
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| ID | 5872884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5660167 |
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| End bp | 5660874 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641550207 |
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| Product | 16S ribosomal RNA methyltransferase RsmE |
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| Protein accession | YP_001671289 |
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| Protein GI | 167036058 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCTGT TGCTTCTTGA AGAGGCCGAC TTCGTCTCGG CCGACCGCGT CGTTCTCGCC
GACCGACGCT TCATCCACAT GCAGGAAATC CATCGCGTGG CGGTGGGTGA CAACCTGCGC
GTGGGCCGCA TCAACGGCCT GATGGGCAAA GCCACGGTGC TGCGCCTGGA AAAGCACGAA
GCCGAACTTG AAGTAGCCTT CGACCAGCCA CCACCGGCCA AGCTGCCATT AACCCTCATA
TTGGCGGTGC CGCGGCCCAA AATGCTGCGG CGGCTGTTCC AGACCGTGGC CACCCTCGGC
GTATCACGGC TGATCCTGGT AAACAGCTAC AAGGTCGAGA AAAGCTTCTG GCAAACGCCT
TTCCTGCAGC CCGAGAGCAT TCGCGAAAAC CTGATCCTCG GCCTGGAACA GGCGCGGGAC
ACGGTGCTGC CCGAGGTGAT CATCGAGAAA CGTTTCAAGC CTTTCGTCGA AGATCGGCTA
CCCGCCATCG CCACTGGCAC CCTGGGCCTG GTCGGCCACC CCGGCCCCTA CCCCGCCTGC
CCGCGTGCCG TGGAGCAAGC CGTAACCCTG GCCATTGGCC CCGAGGGCGG CTGGATCCCC
TACGAAATCG AGCTGCTGGG CAAGGCTGGG CTGGCACCGG TGCAACTGGG TGATCGCATC
CTACGGGTAG AGACCGCCGT CACCGCGCTG CTTTCGCGTA TTTTCTGA
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| Protein sequence | MNLLLLEEAD FVSADRVVLA DRRFIHMQEI HRVAVGDNLR VGRINGLMGK ATVLRLEKHE
AELEVAFDQP PPAKLPLTLI LAVPRPKMLR RLFQTVATLG VSRLILVNSY KVEKSFWQTP
FLQPESIREN LILGLEQARD TVLPEVIIEK RFKPFVEDRL PAIATGTLGL VGHPGPYPAC
PRAVEQAVTL AIGPEGGWIP YEIELLGKAG LAPVQLGDRI LRVETAVTAL LSRIF
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