| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5067 |
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| Symbol | tatB |
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| ID | 5872882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5659008 |
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| End bp | 5659385 |
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| Gene Length | 378 bp |
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| Protein Length | 125 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641550205 |
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| Product | sec-independent translocase |
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| Protein accession | YP_001671287 |
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| Protein GI | 167036056 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1826] Sec-independent protein secretion pathway components |
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| TIGRFAM ID | [TIGR01410] twin arginine-targeting protein translocase TatB |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.437346 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCGGCA TCAGTTTCAG CGAGCTGCTG CTCGTAGGCC TGGTCGCCCT GCTGGTGCTC
GGCCCCGAGC GCTTGCCGGG TGCCGCACGC ACGGCAGGGC TGTGGATCGG CCGGCTCAAG
CGCAGCTTCA ACAGCATCAA GATGGAAGTG GAGCGCGAGA TCGGCGCTGA CGACATCCGC
CGGCAGCTGC ACAACGAGCA CATCCTGCAG ATGGAAGAGG AAGCCAAGCG CATCCTCAAC
CCGCTGACGC CACCCGCGCA GCCGCCGGTA ACCACGGCCA GCGTGCAGCC GCCTGCCGGG
CTCGAAGCCA GGCCGGTCGA AGCACCTGCC GCCCCGGTCG CACCTTCTGA ACCGCCTCAA
CCGCCGCGAG CCCCATGA
|
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| Protein sequence | MFGISFSELL LVGLVALLVL GPERLPGAAR TAGLWIGRLK RSFNSIKMEV EREIGADDIR
RQLHNEHILQ MEEEAKRILN PLTPPAQPPV TTASVQPPAG LEARPVEAPA APVAPSEPPQ
PPRAP
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