Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5065 |
Symbol | hisE |
ID | 5872880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5658371 |
End bp | 5658706 |
Gene Length | 336 bp |
Protein Length | 111 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641550203 |
Product | phosphoribosyl-ATP pyrophosphatase |
Protein accession | YP_001671285 |
Protein GI | 167036054 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0140] Phosphoribosyl-ATP pyrophosphohydrolase |
TIGRFAM ID | [TIGR03188] phosphoribosyl-ATP pyrophosphohydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.518764 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACA CCCTCAACCG CCTGGCCGAA GTGCTTGAAG AACGCAAGCA CGCGGCGCCT GACAGCTCCT ATGTGGCCAG CCTGTACCAC AAGGGCCTGA ACAAGATTCT CGAAAAGCTC GGCGAAGAGT CGGTCGAAAC GATCATTGCT GCCAAGGATG CCGAGCACAG CAAGGATTAC AGCGATGTCA TCTACGAAAC CGCCGACCTG TGGTTTCATA GCCTGGTGAT GCTCAGCGCA CTGGGCCAGC ATCCACAAGC CGTACTCGAT GAGCTGGAGC GCCGTTTCGG GCTTTCCGGG CACGATGAAA AGGCCGCGCG TCAGCCCTCG GCTTGA
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Protein sequence | MSDTLNRLAE VLEERKHAAP DSSYVASLYH KGLNKILEKL GEESVETIIA AKDAEHSKDY SDVIYETADL WFHSLVMLSA LGQHPQAVLD ELERRFGLSG HDEKAARQPS A
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