| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5053 |
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| Symbol | |
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| ID | 5872868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5643319 |
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| End bp | 5644998 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641550191 |
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| Product | poly(R)-hydroxyalkanoic acid synthase, class II |
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| Protein accession | YP_001671273 |
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| Protein GI | 167036042 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
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| TIGRFAM ID | [TIGR01839] poly(R)-hydroxyalkanoic acid synthase, class II |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAACA AGAACAACGA TGAGCTGCAG CGGCAGGCCT CGGAAAACAC CCTGGGGCTG
AACCCGGTCA TCGGCATTCG CCGCAAGGAC CTGTTGAGCT CGGCACGCAC TGTGCTGCGC
CAGGCCGTGC GCCAACCGCT GCACAGCGCC AAGCATGTGG CCCACTTTGG CCTGGAACTG
AAGAACGTGT TGCTGGGCAA GTCCAACCTG GCCCCGGAAG GCGACGACCG TCGCTTCAAC
GACCCGGCCT GGAGCAACAA CCCACTGTAC CGCCGCTACC TGCAAACCTA CCTGGCCTGG
CGCAATGAAC TACAGGACTG GATCGGCAGC AGCGACCTGT CACCCCAGGA CATCAGCCGC
GGCCAGTTCG TCATCAACCT GATGACCGAG GCCATGGCGC CGACCAATAC CCTGTCCAAC
CCGGCCGCGG TCAAACGTTT CTTCGAAACA GGCGGCAAGA GCCTGCTCGA TGGCCTGTCA
AACCTGGCCA AGGACATGGT CAACAATGGC GGCATGCCCA GCCAGGTGAA CATGGATGCC
TTCGAAGTGG GCAAGAACCT GGGTACCAGC GAAGGCGCGG TGGTGTACCG CAACGATGTG
CTGGAACTGA TCCAGTACAG CCCCATCACC GAGCAGGTAC ACGCTCGCCC GCTGCTGGTG
GTACCGCCGC AGATCAACAA GTTCTACGTG TTCGACCTGA GCCCGGAAAA AAGCCTGGCA
CGCTTCTGCC TGCGCTCGCA GCAGCAGACC TTCATCATCA GCTGGCGCAA CCCGACCAAG
GCCCAGCGCG AGTGGGGCCT GTCCACCTAC ATCGATGCGC TCAAAGAAGC AGTCGACGCG
GTGCTGGCGA TTACCGGCAG CAAGGACCTG AACATGCTCG GTGCCTGCTC TGGCGGCATC
ACCTGCACCG CACTGGTGGG TCACTATGCC GCCATTGGCG AAAACAAGGT CAACGCCCTG
ACCCTGCTGG TCAGCGTGCT CGACACCACC ATGGACAACC AGGTTGCATT GTTCGTCGAC
GAGCAGACCC TGGAGGCCGC CAAGCGCCAC CCCTACCAGG CAGGCGTGCT GGAAGGCAGC
GAAATGGCCA AGGTGTTCGC CTGGATGCGC CCCAATGACT TGATCTGGAA CTACTGGGTC
AACAACTACC TGCTCGGCAA TGAACCGCCG GTGTTCGACA TCCTGTTCTG GAACAACGAC
ACCACGCGCC TGCCGGCCGC CTTCCACGGC GACCTGATCG AAATGTTCAA GAGCAACCCG
CTGACGCGCC CCGAAGCCCT GGAAGTGTGC GGCACCGCAA TCGACCTGAA GCAGGTCAAA
TGCGACATCT ACAGCCTTGC CGGCACCAAC GACCACATCA CCCCCTGGCA GTCGTGCTAC
CGCTCGGCAC ACCTGTTTGG CGGCAAGATC GAGTTCGTGC TGTCCAACAG CGGGCATATC
CAGAGCATCC TCAACCCGCC GGGCAACCCC AAGGCACGCT TCATGACCGG TGCCGACCGC
CCAGGCGACC CAGTGGCCTG GCAGGAAAAC GCCACCAAGC ATGCCGACTC CTGGTGGTTG
CACTGGCAAA GTTGGCTGGG CGAGCGTGCC GGCGCGCTGA AAAAGGCGCC CACCCGCCTG
GGCAACCGTG CCTACGCTGC CGGCGAGGCC TCCCCAGGCA CGTACGTTCA CGAACGTTGA
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| Protein sequence | MSNKNNDELQ RQASENTLGL NPVIGIRRKD LLSSARTVLR QAVRQPLHSA KHVAHFGLEL
KNVLLGKSNL APEGDDRRFN DPAWSNNPLY RRYLQTYLAW RNELQDWIGS SDLSPQDISR
GQFVINLMTE AMAPTNTLSN PAAVKRFFET GGKSLLDGLS NLAKDMVNNG GMPSQVNMDA
FEVGKNLGTS EGAVVYRNDV LELIQYSPIT EQVHARPLLV VPPQINKFYV FDLSPEKSLA
RFCLRSQQQT FIISWRNPTK AQREWGLSTY IDALKEAVDA VLAITGSKDL NMLGACSGGI
TCTALVGHYA AIGENKVNAL TLLVSVLDTT MDNQVALFVD EQTLEAAKRH PYQAGVLEGS
EMAKVFAWMR PNDLIWNYWV NNYLLGNEPP VFDILFWNND TTRLPAAFHG DLIEMFKSNP
LTRPEALEVC GTAIDLKQVK CDIYSLAGTN DHITPWQSCY RSAHLFGGKI EFVLSNSGHI
QSILNPPGNP KARFMTGADR PGDPVAWQEN ATKHADSWWL HWQSWLGERA GALKKAPTRL
GNRAYAAGEA SPGTYVHER
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