| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5014 |
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| Symbol | |
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| ID | 5872829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5599798 |
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| End bp | 5601795 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641550152 |
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| Product | transketolase |
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| Protein accession | YP_001671234 |
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| Protein GI | 167036003 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.16096 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGCC GTCGTGAACG TGCCAACGCC ATTCGTGCCC TCAGCATGGA TGCCGTGCAA
AAGGCCAACA GCGGCCACCC AGGTGCCCCC ATGGGCATGG CGGATATCGC CGAAGTGCTT
TGGCGCGACT ATCTGAAGCA CAACCCGAGC AACCCGAGCT TCGCCGACCG TGACCGCTTC
GTGCTGTCCA ACGGCCACGG CTCGATGCTG ATCTACTCGC TGCTGCACCT GACCGGCTAC
GACGTCACCA TCGATGACAT CAAAGGCTTC CGCCAGCTGC ACAGCCGCAC CCCGGGCCAC
CCGGAATACG GCTACACCCC AGGCGTCGAG ACCACCACTG GCCCGCTCGG CCAAGGTATC
GCCAATGCCG TGGGCTTCGC CCTGGCCGAA AAAGTGCTGG CTGCCCAGTT CAACCGTGAC
GGCCACAACA TCGTCGACCA CAACACCTAC GTGTTCCTCG GCGACGGCTG CATGATGGAA
GGTATCTCCC ACGAAGTCGC CTCGCTGGCC GGCACCCTGG GCCTGAACAA GCTGATCGCC
TTCTACGACG ACAACGGCAT TTCCATCGAC GGCGAAGTGC ACGGCTGGTT CACCGACAAC
ACCCCGGCGC GCTTCGAGGC GTACAACTGG CAGGTGATCC GCAACGTCGA CGGCCACGAT
GCCGAAGAAA TCAAGATGGC CATCGAAACG GCGCGCAAAA GCGACCGTCC GACCCTGATC
TGCTGCAAGA CCATCATCGG TTTCGGTTCG CCGAACAAGC AGGGCAAGGA AGACTGCCAC
GGTGCCCCGC TGGGCAACGA CGAAATCGCC CTGGCCCGCA AGGAACTGAA CTGGAACCAC
GGCCCGTTCG AAATCCCAGC CGACATTTAT GCCGAGTGGG ATGCCAAGGC CGCCGGTGCC
AAGGCCGAAG CCGACTGGAA CCAGCGCTTC GACGCCTACG CCAAGGCCTA CCCGGAGCTG
GCTGCCGAGT TCAAGCGCCG TGACAGCGGC GAGCTGCCGG CCGACTTCAG CGAGAAGGCC
CAGGCCTACA TCAACGAAGT GGCTGCCAAA GGCGAAACCA TCGCCAGCCG CAAAGCCAGC
CAGAACGCCC TGAACGCTTT CGGCCCGCTG CTGCCCGAGT TCCTCGGCGG CTCGGCTGAC
CTGGCCGGCT CCAACCTGAC CCTGTGGAAA GGTTGCAAGG GTGTCGAAGC CAATGACGCC
AGCGGCAACT ACGTGTTCTA CGGCGTGCGC GAGTTCGGCA TGACCGCCAT CATGAACGGC
GTTGCCCTGC ACGGTGGCCT GGTGCCTTAC GGCGCGACCT TCCTGATGTT CATGGAATAC
GCCCGCAACG CCGTGCGCAT GTCGGCGCTG ATGAAGCAGC GCGTGATCCA CGTGTACACC
CACGACTCCA TCGGCCTGGG CGAAGACGGC CCGACTCACC AGCCGATCGA GCAGCTGACC
AGCCTGCGCA GCACGCCGAA CCTGGACACC TGGCGCCCAG CCGACGCGGT GGAGTCCGCC
GTGTCCTGGA AAAACGCCCT GGAGCGCAAG GACGGCCCTT CGGCGCTGAT CTTCTCGCGT
CAGAACCTGC AGCACCAGGA CCGCAACGCC CAGCAGATCG CCGACATCAG CCGTGGTGGC
TACGTGCTCA AGGACTGCGC TGGCGAGCCT GAGCTGATCC TGATCGCTAC CGGTTCGGAA
GTGGGCCTGG CTGTTCAGGC CTTCGACAAG CTGACCGAGC AAGGCCGCAA GGCGCGCGTG
GTCTCCATGC CGTGCACCAG CGTGTTCGAT GCCCAGGACG CTGCCTACAA GCAGTCCGTG
CTGCCGCTGG AAGTCGGTGC GCGCATCGCC ATCGAAGCCG CCCACGCCGA CTTCTGGTAC
AAGTACGTCG GCCTGGAAGG TCGTATCATT GGCATGACCA CCTACGGTGA GTCGGCGCCA
GCTTCGGCAC TGTTCGAAGA GTTTGGTTTC ACCCTGGAGA ACATCCTGGG TACTGCCGAA
GAGCTGCTGG AAGACTGA
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| Protein sequence | MPSRRERANA IRALSMDAVQ KANSGHPGAP MGMADIAEVL WRDYLKHNPS NPSFADRDRF
VLSNGHGSML IYSLLHLTGY DVTIDDIKGF RQLHSRTPGH PEYGYTPGVE TTTGPLGQGI
ANAVGFALAE KVLAAQFNRD GHNIVDHNTY VFLGDGCMME GISHEVASLA GTLGLNKLIA
FYDDNGISID GEVHGWFTDN TPARFEAYNW QVIRNVDGHD AEEIKMAIET ARKSDRPTLI
CCKTIIGFGS PNKQGKEDCH GAPLGNDEIA LARKELNWNH GPFEIPADIY AEWDAKAAGA
KAEADWNQRF DAYAKAYPEL AAEFKRRDSG ELPADFSEKA QAYINEVAAK GETIASRKAS
QNALNAFGPL LPEFLGGSAD LAGSNLTLWK GCKGVEANDA SGNYVFYGVR EFGMTAIMNG
VALHGGLVPY GATFLMFMEY ARNAVRMSAL MKQRVIHVYT HDSIGLGEDG PTHQPIEQLT
SLRSTPNLDT WRPADAVESA VSWKNALERK DGPSALIFSR QNLQHQDRNA QQIADISRGG
YVLKDCAGEP ELILIATGSE VGLAVQAFDK LTEQGRKARV VSMPCTSVFD AQDAAYKQSV
LPLEVGARIA IEAAHADFWY KYVGLEGRII GMTTYGESAP ASALFEEFGF TLENILGTAE
ELLED
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