Gene PputGB1_4952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4952 
Symbol 
ID5872767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5525341 
End bp5526405 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content63% 
IMG OID641550090 
Productiron-sulfur cluster binding protein 
Protein accessionYP_001671172 
Protein GI167035941 
COG category[C] Energy production and conversion 
COG ID[COG1600] Uncharacterized Fe-S protein 
TIGRFAM ID[TIGR00276] iron-sulfur cluster binding protein, putative 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.279227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.302526 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCT CTACACCTGA CCTCGCCCAA CTGGCCCAAT CGATCAAGAT TTGGGGCCAG 
GAACTCGGTT TTGCCCATGT TGGCATCGCC GGGGTTGACC TTGGCGAACA CGAACACCAC
CTGCAGCGCT GGCTCGACGC CGGCTACCAG GGCGAAATGG AATACCTGGG CGCCCACGGC
AGCAAAAGGT CACACCCCGA CCAGCTGATC CCCGGCACGG TACGCGTGGT CTCGCTGCGC
ATGGACTACC TGCCTGGCGA CACACAAATG GCGCAGCGCC TGGCACAACC AGAAAAGGCC
TACATTTCGC GCTATGCGCT GGGCCGGGAC TACCACAAAC TGGTGCGCAA GCGCGTGCAG
TTCCTTGCCG ATCGTATTCA GGAAGCCATC GGCCCGTTCG GGTACCGCGC CTTCGTCGAC
AGCGCCCCGG TGCTGGAAAA GGCCTTGGCC GAACAGGCCG GGCTGGGCTG GATCGGCAAG
AACACGCTGT TGCTCAACCG CAAGGCCGGT AGCTATTTCT TCCTTGCCGA ACTGTTTGTC
GACCTGCCGT TGCCGGTGGA CGAAGCCACC ACCAGCGAGC ACTGCGGGCG GTGCCAGGCC
TGCCTGGACA TCTGCCCGAC CCAGGCGTTT GTCGGGCCCT ATGTGCTGGA TGCACGGCGC
TGCATCTCGT ACCTGACCAT CGAGCTGAGG GGCGCGATCC CTGTCGAGCT GCGCGCGAAG
ATGGGCAACC GGGTGTTCGG TTGCGACGAC TGCCAGATCG TCTGCCCCTG GAACCGCTTC
GCCAAGCACA GCCAGGAGCA GGATTTCCAG CCACGGCACG GGCTGGAGAA TGCCGAGTTG
GCGGAAATGT TCCTGTGGGA TGAACGCACC TTCCTGCGCA AGACCGAAGG TGGGCCGTTG
CGGCGGGCGG GGTATGAACG GTTCTTGCGC AACCTGGCGG TGGGGTTGGG CAATGCGCCG
TCCACGATTC CAGTGATAGA GGCACTGAAG GCGCGGCGTG AAGATGCATC TGAGCTGGTA
CGCGAGCACG TTGAATGGGC GCTGGCCCGA CACGACATTC AGTAG
 
Protein sequence
MSASTPDLAQ LAQSIKIWGQ ELGFAHVGIA GVDLGEHEHH LQRWLDAGYQ GEMEYLGAHG 
SKRSHPDQLI PGTVRVVSLR MDYLPGDTQM AQRLAQPEKA YISRYALGRD YHKLVRKRVQ
FLADRIQEAI GPFGYRAFVD SAPVLEKALA EQAGLGWIGK NTLLLNRKAG SYFFLAELFV
DLPLPVDEAT TSEHCGRCQA CLDICPTQAF VGPYVLDARR CISYLTIELR GAIPVELRAK
MGNRVFGCDD CQIVCPWNRF AKHSQEQDFQ PRHGLENAEL AEMFLWDERT FLRKTEGGPL
RRAGYERFLR NLAVGLGNAP STIPVIEALK ARREDASELV REHVEWALAR HDIQ