| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4940 |
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| Symbol | |
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| ID | 5872755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5510866 |
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| End bp | 5512800 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641550078 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001671160 |
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| Protein GI | 167035929 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.000311105 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCTGCCA TCCTCTCACT GTTACGAAGC CGCCTCTTGC GGCCTGTGTT TGTTGCCCTT
GGTATCGCTC TTTTGGTGCA GGTGCTGGTG GCCGTTGCGC TTACCCGAAG CACAGTCACT
GCTCTGGAGG CCGACCTTGG CGAGCGCCTG GGCAATGACA GCCGCCAGCT CGCCAGCGAC
CTGGAGCAAG CTGGGCAAGA TGTGCGCACG GGGCTCGACG GCCTGTCCAG CAGCACCCGT
CAGCGCCTGA GTGCAGGGTT GTCGGAACGC CTGCAAAGCG AACAGCAGCA ACTGCGCAAC
ACCCTGGAAA AGAACCTCAA GGACTCCGCC AACGACATGG CCGAGCTACT GGCTTCGGTT
GCGCCTAGGG CGATCTGGGA CAACGATGTG CCGGTACTCT CCGACTTCGC CCGGCGCGCC
CAGCGCAACC CTAACGTGCT GTTCGTGGTG TACGACGACG CCCAGGGCCA GCACCTGACC
CGCTACCTCA ACCGGCAAAA CCCGATCAAT CAGGCGCTGA TGGAAAAGGG CCAAGGCGAG
CGTGCGCTGG ACAAGGTGAT CGATGCCGCC CGGCGCGACC CGGCGGTGTA CTTTGTCGAA
GCCTCGATCA ACCCCAATGG CGCAGAAATC GGCAAGGTGG TGATGGGGGT TTCCACGGCC
GGTATCGATC AGGAGCTCAA AGCCCTGGAT CAACGCTTTG CGGCACTGAT CGCCAGTGGT
GAACAGCTGG TTGGTGACAG CCTGGTCGGC GCTGCTGCCG ACAGTGGCAA GACCCTGCGC
GAACGCCTGG AGAAAGCCCA AGGCAGCGCG GCCGCAATGC AGGCCAATAC CGCGCAGACC
GTGCGCGAAG CCGCCGCCGA GCTGCGCTGG CGCATCGGTC TGGGCCTGGT GCTGGTTGGC
CTGGGCGTAC TGTTGGTGGT GGCTTTAGTG CTGGGTCGTC GAGTGTTGAG CAAGCTGCGT
TTGTTAATTG GCGCCTTGGA CGATCTGGCG GCCGGTGAAG GTGACCTGAC CAAGCGCGTG
CCGCTCGACA GCCGCGATGA AATTGGCGAC ATGGCCTCGG CGGTGAACCG CTTTGTCGAC
AAGCTGCAAC CGATCGTGCG CGAGGCGGGT GAAGTGGCGC AGCGCACCGG CGTGGAAATT
GGTGCAATGG CCCAGCGCAA TGCGGGTGCC GATGCCGCTG CTGCGCTGCA GCGCGATGAA
GTGGCGGCTA GCCTGCGTGA CCTGTCGAGC ATGGCCGATG AGGCTCAGGC CGAAAGCCAT
GCGATGCAGG CGGCCTTGCA GCAGGTGGTG GATATCCGCC AGGCCACTGA CGAGAACAGT
CGCACCTCGA CCCAGCTCGC CGGCTTGATC GAGAACCTGG CCGGGCAAGT GAATACCGGC
TCCCAGGTGA TCGAGCGGCT GGCCAAGCAG AGTGAGCAGA TCGAAGTGGT GCTGACAGTG
ATCCATGGCA TCGCCGAGCA GACCAATCTG TTGGCCTTGA ATGCTGCCAT CGAGGCGGCC
CGAGCTGGTG AAACCGGGCG CGGTTTTGCC GTGGTAGCCG ACGAAGTGCG GGCGCTGGCG
AGCAAGACGC AAAGCTCCAC CGGGGATATC CAGGCGCATA TTGCCGCGTT GCAGAAGGGC
GCCAAGGAAG CAGTGGCGAC TATCAGCCAG GCCGGGCTCA AGGCCAGCGA AGGGTTGCTG
GTGCTGCGTG ACAACGAACG CCGGCAACAG TCGGTGCAGG CGGCGGTCGA GCAGGTGCAT
GCGGCCATTG GCCTTGCTAC CCGCGCTGCT GAGCAGCAGG CGAATGGCGC GCAGGCGGTG
CGTGGCCGGG TGGAAACCAT CCATGCCCAG GCTGAGCGCT CGGCTGAGGT GGTGATGCAG
ACCACGGCCA GCAGCAAGGT GCTGGATGAC TTGGCGGCGC AATTGCGGGC AAGCCTGGGA
CAATTCAGGG CATAA
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| Protein sequence | MSAILSLLRS RLLRPVFVAL GIALLVQVLV AVALTRSTVT ALEADLGERL GNDSRQLASD
LEQAGQDVRT GLDGLSSSTR QRLSAGLSER LQSEQQQLRN TLEKNLKDSA NDMAELLASV
APRAIWDNDV PVLSDFARRA QRNPNVLFVV YDDAQGQHLT RYLNRQNPIN QALMEKGQGE
RALDKVIDAA RRDPAVYFVE ASINPNGAEI GKVVMGVSTA GIDQELKALD QRFAALIASG
EQLVGDSLVG AAADSGKTLR ERLEKAQGSA AAMQANTAQT VREAAAELRW RIGLGLVLVG
LGVLLVVALV LGRRVLSKLR LLIGALDDLA AGEGDLTKRV PLDSRDEIGD MASAVNRFVD
KLQPIVREAG EVAQRTGVEI GAMAQRNAGA DAAAALQRDE VAASLRDLSS MADEAQAESH
AMQAALQQVV DIRQATDENS RTSTQLAGLI ENLAGQVNTG SQVIERLAKQ SEQIEVVLTV
IHGIAEQTNL LALNAAIEAA RAGETGRGFA VVADEVRALA SKTQSSTGDI QAHIAALQKG
AKEAVATISQ AGLKASEGLL VLRDNERRQQ SVQAAVEQVH AAIGLATRAA EQQANGAQAV
RGRVETIHAQ AERSAEVVMQ TTASSKVLDD LAAQLRASLG QFRA
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