Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4933 |
Symbol | rpsR |
ID | 5872746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5502657 |
End bp | 5502887 |
Gene Length | 231 bp |
Protein Length | 76 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641550069 |
Product | 30S ribosomal protein S18 |
Protein accession | YP_001671153 |
Protein GI | 167035922 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0238] Ribosomal protein S18 |
TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00000854262 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCACGTT TCTTCCGTCG TCGTAAATTC TGCCGCTTCA CTGCTGAAGA CGTGAAAGAG ATCGACTTCA AAGATCTCAA CACCCTGAAA GCTTACGTAT CCGAAACCGG CAAGATCGTT CCAAGCCGTA TCACCGGTAC CAAAGCTCGT TATCAGCGTC AGCTGGCTAC CGCTATCAAG CGCGCCCGCT TCCTGGCCCT GCTGCCCTAC ACCGACAGCC ACGGCCGCTG A
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Protein sequence | MARFFRRRKF CRFTAEDVKE IDFKDLNTLK AYVSETGKIV PSRITGTKAR YQRQLATAIK RARFLALLPY TDSHGR
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