| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4895 |
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| Symbol | |
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| ID | 5872708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5461640 |
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| End bp | 5463007 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641550031 |
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| Product | peptidase |
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| Protein accession | YP_001671115 |
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| Protein GI | 167035884 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.606193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.435136 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGGAA CACGCAGCAA TTTCTATAAC CTGGCCTGGC GTTGGCACTT CTATGCGGGG
CTGTTCGTGG CCCCGTTCAT GATCCTGTTG GCGATCACCG GGATCATCTA CCTGTTCAAG
CCGCAGCTCG ACCCGCTGCT GTACCGCGAC TTGATGGTGG TCGAAGCCGG CCACCACCGG
CAGGGCGCGG ACATGATGCT GGCCGAAGTA CGCCAGGCTT ACCCCAAGGG CCATGTCGGC
CAGTACCTGC CGCCACTGAG CGCCGAGCGC AGTGCACAGT TCGTGGTGCA TGACGGCGGG
CGCGAACTGA ACGTTTTCGT CGACCCCTAC AACGGCAAGG TCCTCGGTGA GCAGGACGGC
AAGCAGAACC TGCAGGCCAT CGCCCGTGCG CTGCATGGTG AACTGATGGT CGGCACGCTC
GGCGACCGCC TGGTGGAACT GGCCGCCGGC TGGGGCATCG TGCTGGTGGT GTCGGGCCTG
TACCTGTGGT GGCCACGCGG ACGCAATGGC GCTGGCGTGC TGTGGCCCCG GTTCAGTGCG
CGCGGCCGCT TGTTCTGGCG CGACCTGCAT GCGGTAACTG GCTTCTGGGG TTCGGCCCTG
TTGTTGCTGA TGCTGGTCAG CGGCATGACC TGGACCGGCC TGTGGGGCAA GCAGTATGCC
GATTTGTGGA ACCGCTTCCC GGCCGCCATG TGGAACGACG TGCCCAAGTC GGACCAACAG
GCGGGTGAGC TGAACAACGC ACACCGCCAA ACCGTGCCCT GGGCGATGGA AAACACGCCA
ATGCCGCAGT CTGGCGCACA CGCCGAACAC GCCGGCCACT CCATGATGTC AGACATGCCC
GCAGCGCCTC AGGTGAGCGT GCAGCAGGTC GAGGACATCG CCACTTCGCG CCAGGTCGAG
CCGGGCTACA GCATCACCCT GCCCACCACT GCCGACGGGG TGTTCACCAT TGCCGTGTTC
GCCGACGACC CGCGCAACGA TGCTACCTTG CATGTCGATC AATACACCGG CAAGGTTCTG
GCCGATGTGC GCTGGCAGGA CTACAGCCCG GTCGCCCGCG CCACCGAGAT GGGCGTGATG
CTGCATGAAG GCAAGATGTT CGGGGCGTTC AACCAGATCG TCATACTGCT GGTGTGCCTG
ATGATACTGC TGGGCTCGGT GAGCGGCCTG GTGATGTGGT GGAAGCGCCG GCCAGCCGGT
GGGCTGGGCG TGCCGCCGCT GCGTCATGAC CTGCCGCGCT GGAAGACGGC GGTGGGGGTA
ATGCTGGTGC TGGGGGTGAT GTTCCCGCTG GTGGGGGTAT CGATGGTGGT GATGTGGGTT
GTCGATAGCC TGGTGGTAAG GCGCCGTCGG ATGCTGGTTC AGGCTTGA
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| Protein sequence | MRGTRSNFYN LAWRWHFYAG LFVAPFMILL AITGIIYLFK PQLDPLLYRD LMVVEAGHHR
QGADMMLAEV RQAYPKGHVG QYLPPLSAER SAQFVVHDGG RELNVFVDPY NGKVLGEQDG
KQNLQAIARA LHGELMVGTL GDRLVELAAG WGIVLVVSGL YLWWPRGRNG AGVLWPRFSA
RGRLFWRDLH AVTGFWGSAL LLLMLVSGMT WTGLWGKQYA DLWNRFPAAM WNDVPKSDQQ
AGELNNAHRQ TVPWAMENTP MPQSGAHAEH AGHSMMSDMP AAPQVSVQQV EDIATSRQVE
PGYSITLPTT ADGVFTIAVF ADDPRNDATL HVDQYTGKVL ADVRWQDYSP VARATEMGVM
LHEGKMFGAF NQIVILLVCL MILLGSVSGL VMWWKRRPAG GLGVPPLRHD LPRWKTAVGV
MLVLGVMFPL VGVSMVVMWV VDSLVVRRRR MLVQA
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