| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4869 |
|---|
| Symbol | |
|---|
| ID | 5872682 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 5435042 |
|---|
| End bp | 5435404 |
|---|
| Gene Length | 363 bp |
|---|
| Protein Length | 120 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641550005 |
|---|
| Product | LrgA family protein |
|---|
| Protein accession | YP_001671089 |
|---|
| Protein GI | 167035858 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1380] Putative effector of murein hydrolase LrgA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 0.914348 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTTGC GTGGTTTGAC CTGGCTGGTG CTGTTCCAGC TTTTGGGGAC GGCGATCAAT
CACCTGTTTG TGCCGTTCTT GCCTGGGCCG ATCATCGGCC TTTTGTTGCT GCTGTTCTTC
CTCATGGCTC GCGGCGAGGT GGGCAAGCCG CTGAACGAGG CCGCCAGTAG CCTGTTGCGC
TACTTGCCGC TGTTGCTGGT GCCGCCGGCA GTGGGGGTGA TGGTGTATGC CAAGGACATT
GCCGCCGACT TCTGGGCGAT TGCCGGGGCC TTGCTGATTT CTTGTCTGAT GACCCTGGTG
TTCGTCGGTG TGCTGATGCA AAAGCTCATC CATCGCCAGG GCAAGCGTGA GGAGCAGCCA
TGA
|
|---|
| Protein sequence | MLLRGLTWLV LFQLLGTAIN HLFVPFLPGP IIGLLLLLFF LMARGEVGKP LNEAASSLLR
YLPLLLVPPA VGVMVYAKDI AADFWAIAGA LLISCLMTLV FVGVLMQKLI HRQGKREEQP
|
|---|
| |