Gene PputGB1_4848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4848 
Symbol 
ID5872661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5415584 
End bp5416189 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content61% 
IMG OID641549984 
Productrare lipoprotein B 
Protein accessionYP_001671068 
Protein GI167035837 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2980] Rare lipoprotein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAC GCAATTTGCT GGTAATCGGC CTGGCGGTCA TGCTGAGCGC CTGCGGTTTC 
CAGCTGCGCG GCACCGGCTC CACCGAGCTG AGCGTGAAGG AAATGGACGT CAGCGCACGC
AATGCCTACG GCCCGACCGT GGTTCAACTG CGTGAAGTAC TGGAACGTAG CGGCGTCAAC
GTGCACGCAG GTGCACCGTA TCGCCTGGTG CTGACCAACG AACAGGAGCG TGAGCGCTCG
GCCACTTACA ACAGTGGCAA CCGTACCGCC GAGTACGAGC TGACCACAGA GCTGAACTAC
AGCATCCAGG GCCTGAATAA CCTGGAGCTG ATGAGCGACA AGCTGGAAGT GCGCAAGATC
TACGTGCGTG ACGGCTCGAA CATCACCGGT TCCGAGCAGG AAGCCAACCG CGCCCGTGAA
GAAATGCGCC GCGACCTGGT CAACGGCATG GTCGTGCGTT TGCAAATGCT GACCCCGTCC
CAGCTGGACG AGCTGCAGCG TAAAGCCGAC GAGCGCGCCA AAGCCGAAGC TGCCGCGTTG
GAGGCTGCCC GCCGCCAGCA AGCCGAAACA CCTCAGCAAT CGCCACTGGA AGTACCGGGC
AACTAA
 
Protein sequence
MIKRNLLVIG LAVMLSACGF QLRGTGSTEL SVKEMDVSAR NAYGPTVVQL REVLERSGVN 
VHAGAPYRLV LTNEQERERS ATYNSGNRTA EYELTTELNY SIQGLNNLEL MSDKLEVRKI
YVRDGSNITG SEQEANRARE EMRRDLVNGM VVRLQMLTPS QLDELQRKAD ERAKAEAAAL
EAARRQQAET PQQSPLEVPG N