Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4848 |
Symbol | |
ID | 5872661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5415584 |
End bp | 5416189 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641549984 |
Product | rare lipoprotein B |
Protein accession | YP_001671068 |
Protein GI | 167035837 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2980] Rare lipoprotein B |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAAC GCAATTTGCT GGTAATCGGC CTGGCGGTCA TGCTGAGCGC CTGCGGTTTC CAGCTGCGCG GCACCGGCTC CACCGAGCTG AGCGTGAAGG AAATGGACGT CAGCGCACGC AATGCCTACG GCCCGACCGT GGTTCAACTG CGTGAAGTAC TGGAACGTAG CGGCGTCAAC GTGCACGCAG GTGCACCGTA TCGCCTGGTG CTGACCAACG AACAGGAGCG TGAGCGCTCG GCCACTTACA ACAGTGGCAA CCGTACCGCC GAGTACGAGC TGACCACAGA GCTGAACTAC AGCATCCAGG GCCTGAATAA CCTGGAGCTG ATGAGCGACA AGCTGGAAGT GCGCAAGATC TACGTGCGTG ACGGCTCGAA CATCACCGGT TCCGAGCAGG AAGCCAACCG CGCCCGTGAA GAAATGCGCC GCGACCTGGT CAACGGCATG GTCGTGCGTT TGCAAATGCT GACCCCGTCC CAGCTGGACG AGCTGCAGCG TAAAGCCGAC GAGCGCGCCA AAGCCGAAGC TGCCGCGTTG GAGGCTGCCC GCCGCCAGCA AGCCGAAACA CCTCAGCAAT CGCCACTGGA AGTACCGGGC AACTAA
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Protein sequence | MIKRNLLVIG LAVMLSACGF QLRGTGSTEL SVKEMDVSAR NAYGPTVVQL REVLERSGVN VHAGAPYRLV LTNEQERERS ATYNSGNRTA EYELTTELNY SIQGLNNLEL MSDKLEVRKI YVRDGSNITG SEQEANRARE EMRRDLVNGM VVRLQMLTPS QLDELQRKAD ERAKAEAAAL EAARRQQAET PQQSPLEVPG N
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