| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4814 |
|---|
| Symbol | |
|---|
| ID | 5872628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 5381364 |
|---|
| End bp | 5382308 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641549952 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001671036 |
|---|
| Protein GI | 167035805 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAACGT CACAAAATAA CGACGGGCCT GGGAAGGGCA CGCCATACGT ACCACCTTGG
ACGCCTCCAT TGCCTCCATT GCCTCCATTG CCTCCATTGC CTCCGGTGCC GCCTCAGCCG
CCTGCTCCTC CCGAGCCGTT AGATCCGACC GATCCGGAGT GCGGCCCTCC AGATGAAGGC
CCTCCTGATC CAGATCAGGA GGCAGCTGAC GATGGAAAAG AGGGTACTGA TGAACCACGG
CAGGTGCCGC AAGCACCGCA GCCAATAGCG CCACCCGGGC GATTTGGTGG TGCACGCCGT
GGTCTAGGTG ACTATGCGAG TAATGGTGAT CGACGTAGCC TGCGCAAAAG CCTTCGCGAC
TATGTGCGTC AGGGCTACGG TGGATCTAAA ACAACCACTG CGCGATTCGG CGGTACTGCT
TCGGTCGCCG GCGCTCTGGC TGCTGCACTT GAATCCGTTG CTGATGCTGC CAACCAGGCC
GCACCAGGTG TGCTCGATCC CGCTATGTGG CAAGGGCGTT CACCTTCGGA GGTGATGGAT
GCGCTAGTTG AGGCGGTGCG TCCGGTAGAC GGTACTCAAG ATGCAGAAGC TGAGCGAGCA
TCCATTCGCG GCTCCCTTTC TGATGTTCTC GTGCGTTATC CGGATGCTGA CCTGCTCAAC
CTTTCGACGG AGCAGCGAGC ATTTGTGATC GAGCGTTATA CAGCGATGGA TGTGTTCCAT
CGATATGAGC TCGACCTCGG TAAAACCATT CAAGAGAAGG CTAAGTCGGC AACCGTGGCT
GTACGCCGCT TGAAGGAAAT CAAGGACTAC ATCAAAGAGT GTGTCTCTGC GTCGTTCCGT
AAGATTGCGG CAACTGGGGC GCGGCTTACA ACGGGCCGGA TTTCGCAGGT GGTCAGCCAG
GCATTGCAGG ACACCTTTGA AGTGTTTGAG GGGTACGTAG AATGA
|
|---|
| Protein sequence | MGTSQNNDGP GKGTPYVPPW TPPLPPLPPL PPLPPVPPQP PAPPEPLDPT DPECGPPDEG
PPDPDQEAAD DGKEGTDEPR QVPQAPQPIA PPGRFGGARR GLGDYASNGD RRSLRKSLRD
YVRQGYGGSK TTTARFGGTA SVAGALAAAL ESVADAANQA APGVLDPAMW QGRSPSEVMD
ALVEAVRPVD GTQDAEAERA SIRGSLSDVL VRYPDADLLN LSTEQRAFVI ERYTAMDVFH
RYELDLGKTI QEKAKSATVA VRRLKEIKDY IKECVSASFR KIAATGARLT TGRISQVVSQ
ALQDTFEVFE GYVE
|
|---|
| |