Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4754 |
Symbol | |
ID | 5872568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5313959 |
End bp | 5314558 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641549892 |
Product | transposase |
Protein accession | YP_001670976 |
Protein GI | 167035745 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.570232 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGAAA AAGGCCCTTT CATACTTGGA TACCTTGAAG CACTGAATCG CACTATTAAC CTTGCCCTTG ATCAGTATCC TAGGGTGATC GCATTCAGGG TGGATTTACG TCTTTCGCGT CTGATGGGTT TTCCAGATGA CGCTTTGTCA AATCGTGTGA TAAGCAGGTT CATCGAGTCG TTCAAAGCAA AAATTGAGCA TAACCGTGAG AAGGCGCGTG AGCTGAACAA GTACGCCCAT GACTGCAGGG TACGTTACGT TTGGGCGAGA GAGAGCAGCG AGGGAGGGCG ACAGCATTAC CACCTGCTGA TCCTGCTCAA CAGAGACGCC TACTACACAG TCGGACGGCT GCAGCCACAG AGGCCTAACA TGATCAGTCG CATGCAGGAG GCTTGGGCGA GTGCGTTGAA GTGCGAGGTT GAGCAAGTGA GGGGCTTGGT ACATATCCCG TCTAATGCAG AATACCGAGT GGATCGGAAT GTCCGGTCAG GTAATGTGGA TCAGTTGGCT GAACTGTTTC ATCGGGCCAG CTACCTCTGC AAAGCTGCGA CCAAGCGTTA TGGAGATGGG GCCCATGGCT TTGGATGCAG CAGGGGATAG
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Protein sequence | MVEKGPFILG YLEALNRTIN LALDQYPRVI AFRVDLRLSR LMGFPDDALS NRVISRFIES FKAKIEHNRE KARELNKYAH DCRVRYVWAR ESSEGGRQHY HLLILLNRDA YYTVGRLQPQ RPNMISRMQE AWASALKCEV EQVRGLVHIP SNAEYRVDRN VRSGNVDQLA ELFHRASYLC KAATKRYGDG AHGFGCSRG
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