Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4749 |
Symbol | |
ID | 5872563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5308311 |
End bp | 5308766 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641549887 |
Product | transposase-like protein TnpA3 |
Protein accession | YP_001670971 |
Protein GI | 167035740 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.677793 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAGA TGAGCTTTTC CGATTTCAAG TACGCCGGTA AGCGCAAGCA AACCCGTCGC GAGCGTTTCC TGGCTGAGAT GGAGCAGGTA GTGCCGTGGA GCGGTTTGGT GGCATTGATC GAGCCGCATT ACCCAAAGGC GGGCGGTGGT CGCAAGCCTT ACCCACTGGA AACTATGCTG CGTGTTCACC TACTGCAGAA CTGGTTCTCG TTGAGCGATC CAGCCATGGA GGAGGCGCTG TACGAGATTA CTTCGATGCG CCAGTTTGCT CGTCTGGGCG TCCTGCGGGG AGATGCTCTT CTGCATGATC GAGAGAAAAA GTATTCCGGT CCAGCTGAAG GCCACGTTTA CGGTAGGGCA GTGGCTTTGG CTGATGGTCC GGCTTCCATT CATCAGTCTG GCCCAGCAGA TAACCGAGAT GGGCAGCTAG TATTTTTGCC TCAACGTTGC TGTTAA
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Protein sequence | MSQMSFSDFK YAGKRKQTRR ERFLAEMEQV VPWSGLVALI EPHYPKAGGG RKPYPLETML RVHLLQNWFS LSDPAMEEAL YEITSMRQFA RLGVLRGDAL LHDREKKYSG PAEGHVYGRA VALADGPASI HQSGPADNRD GQLVFLPQRC C
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