| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4687 |
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| Symbol | |
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| ID | 5872498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5236887 |
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| End bp | 5237771 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641549823 |
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| Product | periplasmic binding protein |
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| Protein accession | YP_001670909 |
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| Protein GI | 167035678 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4558] ABC-type hemin transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0140247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000000000756756 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGCGCC GTCCCGCCGC TTTGCTCGCC TTATGCGCAA GCCTTGTGCT TTCTACCCAG
GCCTTGGCGG CCGAACTGCC GCAACGCTGG GTCAGCGCGG GTGGCGCCCT GAGCGAGTGG
ATAGCCGCGC TGGGCGGTGA AGCCCGCCTG GTCGGAGTGG ACACGACCAG CCAGCACCCG
GCTTCGTTGA AATCGCTGCC TAGCGTGGGT TACCAGCGTC AGTTGTCGGC CGAAGGCATT
CTCAGCCTGC GCCCGGATGT GCTGGTGGGC ACCGAGGAAA TGGGGCCGCC ACCGGTACTG
GCGCAAATCC ACAAGGCGGG CGTGCGGGTC GAGTTGTTCT CCAGCAAGGC CGAGCTGGCG
GCGGTGGACG AAAACCTCAA GCATCTGGGG CAGTTGCTCG GCGCAGAGCA GCAGGCTGCG
ACGCTGGCGA CGGACTACCG CCAGCAGCTT GATGCGTTGC ACGCCAAGGT CAAGCAGGCC
CAGGCCGGGC AACAGGCGCC TGGGGTGGTG TTGCTGGTCG GCCATGCCGG CGCCAAGCCG
CTGATTGCCG GGCAGGGCAC GGCGGGTGAC TGGCTGTTGG GCCAGGCTGG CGGGCGCAAC
CTTGCAGAGC ACCAGGGCTA CAAGAACTTC TCCAACGAAG CACTGGCGGC GCTGGACCCG
GATGTGATCG TGTTTTCCGA CCGGGCGCTG GCCGATGAGC AGGCCTTGCA GGCGCTGTTG
AAAGAAAACC CCGCGCTGGC CGCTTCGCGG GCGGTGCGGG AGAAACGCCT GGTGTCACTG
GACCCGACGC TGCTGGTCGG CGGGCTCGGG CCTCGCCTGC CAGCGACCTT GCAGTCGCTG
GCAGCCACTT TCTACCCGGC AGCCCAGGCT AGCTTTGCGC AATGA
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| Protein sequence | MMRRPAALLA LCASLVLSTQ ALAAELPQRW VSAGGALSEW IAALGGEARL VGVDTTSQHP
ASLKSLPSVG YQRQLSAEGI LSLRPDVLVG TEEMGPPPVL AQIHKAGVRV ELFSSKAELA
AVDENLKHLG QLLGAEQQAA TLATDYRQQL DALHAKVKQA QAGQQAPGVV LLVGHAGAKP
LIAGQGTAGD WLLGQAGGRN LAEHQGYKNF SNEALAALDP DVIVFSDRAL ADEQALQALL
KENPALAASR AVREKRLVSL DPTLLVGGLG PRLPATLQSL AATFYPAAQA SFAQ
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