| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4659 |
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| Symbol | |
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| ID | 5872467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5197437 |
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| End bp | 5198318 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641549792 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001670881 |
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| Protein GI | 167035650 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.991063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.944933 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTTCG ACCTGATCGA CCTCAAGCTG TTCCAACACA CCCTGGAGTG CGGCAACATC
ACCGCCGGCG CCAGCCGCAG CCATCTTTCA CTGGCAGCGG CCAGTGCGCG CATCCGCGCC
ATGGAAGCCT CGCTGGGTAT TCCTTTGCTT GAGCGTAACC GTCGTGGCGT ACAACCGACG
CCGGCCGGCC AGGCGTTGTT GCAGCATGCG CGGCTGATAA CCCAGCAAGT CGAGCGCTTG
CAGTTCGACC TAAGCCAGTA TGCGCAGGGG CAGCAAGGCC AGGTGCGCCT GCTGTGCAAC
ACCGCTGCGC TTACCGAGTA CCTGCCCGAA CTGCTGGCCA GCTTCCTGGC GGAAAACCCC
GGTGTCAGCG TGGACGTGCA AGAGCTGCCG AGCTTGCGCA TCGTGCAGTC GATTACCCAG
GGCATCGCCG ACCTGGGCAT CGTTTCCACC GCTGCCCCCA GCGAGCATCT GCAAACCCGG
CCGTTTCGCG ACGACCCGAT GGTGCTGGTG ACACCGCTGG GCCACCCGCT GGCCCATGCA
GCCGCGCCCA GCTTCATCGA AAGCCTGAGC CATGGCTATG TCGGCCTTGG GGCTGGCAGC
GCGTTGGCAC TGTACCTGGA AGAGCAGGCG CTGCGCGAGG GGCGGCGCAT GCGGATTCGG
GTGCGGGCAG AAGGGTTTGA CGGGGTGATT CGCATGGTGG CGGGCGGTGC AGGTGTCGGG
GTGGTGCCGC TGGCAGCGGT GCAGCGCTGG CAAGGGATGT TGCCGTTGCA TTGGGTAGCG
CTTGAGGAAC CATGGGCCAA CCGCAAGTTG CTGGTATGCG CGCGGGATTT TACTGCGCTA
CCGGGCTATG CCGCAGGGCT GGTCACCACA CTCTGCGGCT GA
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| Protein sequence | MHFDLIDLKL FQHTLECGNI TAGASRSHLS LAAASARIRA MEASLGIPLL ERNRRGVQPT
PAGQALLQHA RLITQQVERL QFDLSQYAQG QQGQVRLLCN TAALTEYLPE LLASFLAENP
GVSVDVQELP SLRIVQSITQ GIADLGIVST AAPSEHLQTR PFRDDPMVLV TPLGHPLAHA
AAPSFIESLS HGYVGLGAGS ALALYLEEQA LREGRRMRIR VRAEGFDGVI RMVAGGAGVG
VVPLAAVQRW QGMLPLHWVA LEEPWANRKL LVCARDFTAL PGYAAGLVTT LCG
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