| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4625 |
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| Symbol | |
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| ID | 5872433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5162303 |
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| End bp | 5163388 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641549758 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001670847 |
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| Protein GI | 167035616 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.147553 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACACC ACGTTCTAGC CGCATTGGCA CTGGCCGCCT GCGCTGGCCA GGCACTGGCC
GAACAGCCGG TGCTGCGCCT GTACAACTGG GCCGACTATT TTGCCGAGGA CACCCTCAAG
CAGTTCACGG CCGAAACCGG TATTCAGGTG ATCTACGACG TGATGGACGG CAGTGAAGTG
CTCGAAGCCA AGCTGATGTC CGGGCGCAGT GGTTACGACC TGGTGTTCCC CGGCGATACC
GTTGCAGAGC GTTTGATGCG CGCTGGCAGC CTGCAGCCAC TGGACCACAG CCGCCTGGAG
GCGCTCGACG ATATCGAGCC CGGCCTGCGC AAGCTGCATG CCCAATACCC CAAGGCCAGC
CAGGCCACGG TGCCCTACAC CTGGGGCACC ATCGGCCTGA CGGTGAACGC CGACAAGGTT
CGCCAGCGCA TGCCTGGTGC ACCGCTGGAC AACCTCGACT TGCTGTTCAA GCCGGAGCTG
GCGGCCAAGT TCGCTGACTG TGGTATCTCG GTCATCGACT CGCCCGATGA AGTGCTGGCC
GTAGTACTCA ACTACCTGGG CCGCGAACCA CGCAGTGCCA AGCGTGAGGA CCTGGCCGCC
GCCAGCGAAC TGCTCAAGGC GATACGCCCG TATGTGCGCA AGTTCCAGTC CCAGCCGGTG
ACCGAATTGG TCAACGAGAA CTTGTGCCTG TCACTGGGCT ACAGCGGCGA TGTGATCCAG
GCCCAGCGTA CCGCCGAGTC CGCTGGCAAG CACCTCGACT TCCAGTACCG CGTACCGCGC
CAAGGCACCA CGGTGTGGAT GGACACCATG GCCATTCCGG CCGATGCCAG GCACCCGGAA
TACGCCTATC GTTTCATCAA CTTCGTCATG CGCCCGGCGA ACATGGCTGC CATCAGCAAC
TTCACCGGCT ACCCCACGGC CAGCGCCAAA GCGCGCCAGG CGGTGGACCC ACGCATGCGC
GACAACCCCG ATATCTATCT CGACGAAGCC ACCTATGCCC GGCTGATTCC GGGCCGGGAT
ATTCCACAGG CCGACATGCG GGCACGCATG CGTGTGTGGA CGCGCTTCAA GACTGCACAG
GACTGA
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| Protein sequence | MKHHVLAALA LAACAGQALA EQPVLRLYNW ADYFAEDTLK QFTAETGIQV IYDVMDGSEV
LEAKLMSGRS GYDLVFPGDT VAERLMRAGS LQPLDHSRLE ALDDIEPGLR KLHAQYPKAS
QATVPYTWGT IGLTVNADKV RQRMPGAPLD NLDLLFKPEL AAKFADCGIS VIDSPDEVLA
VVLNYLGREP RSAKREDLAA ASELLKAIRP YVRKFQSQPV TELVNENLCL SLGYSGDVIQ
AQRTAESAGK HLDFQYRVPR QGTTVWMDTM AIPADARHPE YAYRFINFVM RPANMAAISN
FTGYPTASAK ARQAVDPRMR DNPDIYLDEA TYARLIPGRD IPQADMRARM RVWTRFKTAQ
D
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