Gene PputGB1_4620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4620 
Symbol 
ID5872428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5157010 
End bp5157912 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content64% 
IMG OID641549753 
Productalpha/beta hydrolase fold 
Protein accessionYP_001670842 
Protein GI167035611 
COG category[R] General function prediction only 
COG ID[COG4757] Predicted alpha/beta hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.505321 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGCC TCACCCAACC CGCCGCCCCC TTTCGCCAGG CCACAGCCGA CGGTTACAGC 
CTCGGCGGCT TCTGCTGGCG CCACGCTCGC CCTGACCCCC AGCGTCCGCT GGTGATCATC
AACGCTGCCA CTTCGGTACG CTGCCGCTAT TACTCCCGCT TTGCCGACTA CCTGTTTGCC
CAGGGCTGCG ATGTGCTGAC CTACGATTAC CGTGGCATCG GCGAGTCCCG CCCAGCTTCG
TTGCGCGGCT TCCAGGCCTC GTGGAGCGAT TGGGGCAGGC TGGATTTCGA AGCGATGCTG
GCGCATGCGG CAGAGCATTT CCCCGGTCAG CCAGTAGACG TGGTGGGGCA CAGTTTCGGC
GGCTGCGCAG TAGGGCTGGC CGCGTCGGCA GGCCAGGTAC GCCGGGTAGT GATGGTGGGC
GCGCAGTTTG CCTATTGGCG CGACTACGCG GTCGGCCAGC GCTGGCAGCT GCTCGGCAAG
TGGCATGTGG TAATGCCGCT ACTGACCCGG ATATTCGGCT ACTTCCCCGG CAAACGCCTG
GGTTGGCTTG AAGACACGCC ATCCGGCGTG GTGCACGACT GGACCACACG TACCCCACGT
TACGAGCATC GCCCCAGCGC TCGGGCGCTG GCGACGCTTC CGTTCGTTCA GGTGCGGGCG
GCGACGCTGG CCATCAGCCT CACTGACGAC CCGTTTGGCA CCGTGGCGGC GACCGAGCGA
TTGTTGGGTT ATCTACAGGG TGCCCGGCAC CTGCGTATCG CGCCTGTGGA TATCTCGGTC
GACGAAATTG GCCATTTCGC GTTTTTCCAT GACCGGTTTC GCGAAAGCTT GTGGCCGGTG
GCCTTGCAGT GGCTGCAGCA GGGAGAGCTG AAAGAAGGGG GGCCTGGAAC CATCATGGAT
TGA
 
Protein sequence
MSSLTQPAAP FRQATADGYS LGGFCWRHAR PDPQRPLVII NAATSVRCRY YSRFADYLFA 
QGCDVLTYDY RGIGESRPAS LRGFQASWSD WGRLDFEAML AHAAEHFPGQ PVDVVGHSFG
GCAVGLAASA GQVRRVVMVG AQFAYWRDYA VGQRWQLLGK WHVVMPLLTR IFGYFPGKRL
GWLEDTPSGV VHDWTTRTPR YEHRPSARAL ATLPFVQVRA ATLAISLTDD PFGTVAATER
LLGYLQGARH LRIAPVDISV DEIGHFAFFH DRFRESLWPV ALQWLQQGEL KEGGPGTIMD