| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4577 |
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| Symbol | |
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| ID | 5872385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5116860 |
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| End bp | 5118401 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641549710 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001670799 |
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| Protein GI | 167035568 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.487464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCCC TGACCGCGCC CCCTGCGGCG CTGGCCGCCG CCCCCGCGCC GGCCGCGCCT
GCGCAGACGG CGTTTGGCCT GCAGGTGGTA GTGGGGCTGT TCGGTGTGTT GCTGGCCGTG
CTGTGCGCAG GCCTAAACGA GTCGGTTACC AAGATTTCCC TCGCCGATAT CCGCGGTGCC
ATGGGCATCG GTGCTGACGA AGGTGCCTGG CTGCTGGCGG TGTACAGCGC CGCCTCGGTC
TCGGCCATGG CCTTTGCGCC GTGGCTGGCC ACCACCTTCT CGCTGCGGCG CTTCACCATG
AGCGCCATCG GCCTGTTCGC CGTGCTCGGC TTGCTGCAAC CGTTCGCCCC CAACCTGCAC
AGCCTGATGC TGCTGCGCGT GCTGCAGGGC TTTGCTTCGG GGGCCTTGCC ACCGATGCTG
ATGAGTGTGG CCCTGCGCTT CCTGCCACCG GGCATCAAGG TCTACGGCCT GGCCTGCTAT
GCGCTGACCG CCACCTTCGG CCCCAACCTT GGCACGCCGT TGGCGGGGCT GTGGACCGAG
TATGTCGGTT GGCAATGGGC GTTCTGGCAG ATCATTCTGC CCTCGCTGCT GGCCATCGTC
TGTGTCGGCT GGGGCCTGCC GCAGGACCCG CTGCGCCTGG AACGTTTCAA GCAGTTCGAC
TGGCGTGGCG TGCTGCTCGG CCTGCCCGCC ATCAGTTGCA TCGTACTGGG CCTGTCGCTG
GGCGACCGCT GGGGCTGGTT CGATTCGCCG CTGATCTGCT GGCTGCTGGG CGGTGGCTTG
GTGTTGCTGG TGCTGTTCAT GTTCAACGAG TGGTCCGAAC CGCTGCCGTT CTTCCAGTTG
CGCATGTTGC AGCGGCGCAA CCTGAGTTTC GCGCTGGTGA CACTGGCCGG TGTGCTGATC
GTGCTCTCGG GCGTGGGCAG CATTCCTTCG GCCTACCTGG CGCAGATCCA AGGCTACCGC
CCGGCACAGA CCAGCCCGCT GATGATGCTG GTGGCCATGC CTCAACTGAT CGCCCTGCCG
CTGACGGCGG CACTGTGCAA CATCCGTGCA GTGGACTGCC GCTGGGTGCT GGGTATCGGC
CTGGCGATGC TGGCGGTGTC CTGTGTCGGC AGCAGCCTGC TGACCAGCGA ATGGATCCGT
GGCGACTTCT ACCCGTTCTA CCTGCTGCAG GTGTTCGGCC AGCCGATGGC CGTGCTGCCG
TTGCTGATGC TGTCCACCAA TGGCATGACC CCGCAGGAAG GCCCGTTCGC CTCCAGCTGG
TTCAACACCG TGAAGGGCTT GGCCGCCGTG ATTGCCGGTG GCCTGCTGGA CGCCCTTGGC
ACCCTGCGCC GGCACTTCCA TTCCAACCAC CTGGTGGACA GCCTGGGCAA CGCGCCGCTG
GTCGACGACA GCGCTGCAGG CCTGGCCAAG CGCATCCACG ACCAGGCGTT GGTCCTGACC
TCGGCCGACA TGTACCTCGT CATGGCCTGC ATTGCCGTGG CCTTGATCTG CCTGATTCCT
TTCGTGCCTA CCCGGGTCTA TCCGCCGCGT GCGGTGGCCT GA
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| Protein sequence | MSSLTAPPAA LAAAPAPAAP AQTAFGLQVV VGLFGVLLAV LCAGLNESVT KISLADIRGA
MGIGADEGAW LLAVYSAASV SAMAFAPWLA TTFSLRRFTM SAIGLFAVLG LLQPFAPNLH
SLMLLRVLQG FASGALPPML MSVALRFLPP GIKVYGLACY ALTATFGPNL GTPLAGLWTE
YVGWQWAFWQ IILPSLLAIV CVGWGLPQDP LRLERFKQFD WRGVLLGLPA ISCIVLGLSL
GDRWGWFDSP LICWLLGGGL VLLVLFMFNE WSEPLPFFQL RMLQRRNLSF ALVTLAGVLI
VLSGVGSIPS AYLAQIQGYR PAQTSPLMML VAMPQLIALP LTAALCNIRA VDCRWVLGIG
LAMLAVSCVG SSLLTSEWIR GDFYPFYLLQ VFGQPMAVLP LLMLSTNGMT PQEGPFASSW
FNTVKGLAAV IAGGLLDALG TLRRHFHSNH LVDSLGNAPL VDDSAAGLAK RIHDQALVLT
SADMYLVMAC IAVALICLIP FVPTRVYPPR AVA
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