Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4475 |
Symbol | |
ID | 5872283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5007064 |
End bp | 5008401 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641549610 |
Product | hypothetical protein |
Protein accession | YP_001670699 |
Protein GI | 167035468 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3487] Uncharacterized iron-regulated protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0811777 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTCGAA TGCCTCTGGC CTCCGCCAGT CTGCTGGCCA TTGCCATCGC CCTCGCCGGT TGCGGCGAAG GCAAGGACGA AAAAGCCGCC GCGCCGCAAG CCCAGGCACC TGCTGCCGCC AGCACCACCG CTGCTGCGCC AGGGGCCGTC GACGAAGCCG CCGGCAAAGC CGTGGTCAAG CATTACACCG AAATGGTCTA CGCCGTGTAC AGCGACTCGC TGAGCACCGC CAAGACACTG CAGACCGCCA TCGACGCGTT CCTGGCCAAG CCCAACGACG AAACCCTGAA GGCCGCCAAG GAAGCCTGGT TCGCCGCGCG CGTACCGTAC CTGCAAAGCG AAGCCTTCCG CTTCGGCAAC ACCATCATCG ACGACTGGGA AGGCCAGGTG AACGCCTGGC CCCTGGACGA AGGCCTGATC GACTACGTCG ACAAGAGCTA CGAGCACGCC TTGGGCAACC CGGCCGCCGG CGCCAACATC ATCGCCAACA CCGAGATTCA GGTGGGTGAA GAGAAGGTCG ACGTCAAGGA CATTACCCCC GAGAAACTGG CCAGCCTGAA CGAGCTGGCG GGCTCCGAGG CCAACGTCGC CACCGGCTAC CACGCCATCG AGTTCCTGCT CTGGGGCCAG GACCTGAACG GCACCGGCCC AGGCGCTGGC AACCGCCCGG CATCCGACTA CCTGGAAGGC CAGGGCGCTA CCGGTGGCCA CAACGACCGC CGTCGTGCCT ACCTGAAAGC GGTTACCGAC CTGCTGGTCA GCGACCTCGA AGAGATGGTC GGCAACTGGG CACCGAACGT CGCCGACAAC TACCGCGCCA AGCTGGAAGC CGAGCCTGTC AACGACGGCC TGCGCAAGAT GCTGTTCGGC ATGGGCAGCC TGTCGCTGGG CGAACTGGCT GGCGAGCGCA TGAAGGTTTC GCTGGAAGCC AACTCGCCGG AAGACGAGCA GGACTGCTTC AGCGACAACA CCCACTACTC GCACTTCTAC GACGCCAAGG GCATCCGCAA CGTCTACCTG GGCGAGTACA CCCGCCCGGA CGGCACCAAG GTAAGCGGCC CAAGCCTGTC GTCGTTGGTC GCCAAGGTCG ACCCGGCTAC CGATGCAGCC CTCAAGGCCG ACCTGGAGGC CACCGAAGCC AAGATTCAGG TGATCGTCGA CCACGCCCTC AAAGGCGAGC ACTACGACCA ACTGATCGCT GCCGACAACG CGGCCGGCAA CCAGATCGTG CGTGACGCCA TCGCCGCCCT GGTCAAGCAG ACCGGTTCGA TCGAGCAGGC TGCAGGCAAG CTGGGCATCG CCAACCTGAA CCCGGACACT GCGGATCACG AATTCTGA
|
Protein sequence | MIRMPLASAS LLAIAIALAG CGEGKDEKAA APQAQAPAAA STTAAAPGAV DEAAGKAVVK HYTEMVYAVY SDSLSTAKTL QTAIDAFLAK PNDETLKAAK EAWFAARVPY LQSEAFRFGN TIIDDWEGQV NAWPLDEGLI DYVDKSYEHA LGNPAAGANI IANTEIQVGE EKVDVKDITP EKLASLNELA GSEANVATGY HAIEFLLWGQ DLNGTGPGAG NRPASDYLEG QGATGGHNDR RRAYLKAVTD LLVSDLEEMV GNWAPNVADN YRAKLEAEPV NDGLRKMLFG MGSLSLGELA GERMKVSLEA NSPEDEQDCF SDNTHYSHFY DAKGIRNVYL GEYTRPDGTK VSGPSLSSLV AKVDPATDAA LKADLEATEA KIQVIVDHAL KGEHYDQLIA ADNAAGNQIV RDAIAALVKQ TGSIEQAAGK LGIANLNPDT ADHEF
|
| |