| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4430 |
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| Symbol | |
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| ID | 5872238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4960609 |
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| End bp | 4961865 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641549565 |
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| Product | outer membrane porin |
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| Protein accession | YP_001670654 |
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| Protein GI | 167035423 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0138033 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACTT TGCAACCCGC ACGCCAGCTG CTGCCCGGCC TGTTGGCCAT GTCCTGCGCC
CTCCCCGTGT TCGCCGCCAA CGAAGGTGGA TTCATGGAGG ATGCCAAGGC CACCCTCAAC
CTGCGCAACT TCTACATCAA CCGCAACTTC GTCGACCCGG CCCATCCGCA GGGCAAGGCC
GAGGAATGGA CGCAAAGCTT TATCCTCGAC GCCCGTTCCG GGTTTACCCA GGGCACCGTC
GGTTTCGGCG TGGACGTCCT GGGCCTGTAT TCGGTCAAGC TCGACGGTGG CAAAGGCACC
ACCAACACTC ACCTGCTGCC CGTGCATGAC GACGGCCGCC CTGCCGATGA CTTTGGCCGG
TTGGGTGTAG CACTGAAAGC CAAGCTGTCC GAAACCGAAC TGAAAGTCGG CGAATGGATG
CCGGTACTAC CGATCCTGCG CTCGGACGAT GGCCGTTCGC TGCCGCAAAC CTTCCGCGGT
GGCCAGCTGA CCTCCAAGGA AATCGCCGGC CTGACCCTGT ACGCCGGCCA GTTCCGCGGC
AACAGCCCGC GCAATGACGC CAGCATGGAA GACATGTCGC TGAACGGCAA AGCCGCGTTC
ACCTCCGACC GATTCAACTT CGGCGGCGGT GAGTACACCT TCAACGACAA GCGCACCATG
ATTGGCCTGT GGGACGCCCA GCTCAAGGAC ATCTACCGCC AGCAGTACCT CAACCTGACG
CACAGCCAGC CGCTGGGCGA CTGGACCCTG GGCGCCAACC TGGGCTACTT CATCGGCAAG
GAAGACGGCG GCGAACGTGC CGGCAAGCTG GACAACCGCA CCGCTTCCGC CCTGCTTTCG
GCACGCTACC AAGGCCATAC CTTCTATGTC GGGCTGCAGA AGGTGAGCGG CGACGATGCC
TGGATGCGGG TCAATGGCAC CAGTGGCGGC ACCCTGGCCA ACGACAGCTA CAACTCGAGC
TTCGACAATG CCAAGGAGCG CTCCTGGCAG GTTCGCCATG ACTTCAACTT CGCCACCGTC
GGCGTACCCG GCCTGACCCT GATGAACCGC TACATCAAGG GTGACAACGT GACCGTTGGC
AACGTGGACG ATGGCAAGGA ATGGGCACGG GAAACCGAGC TGGCCTATGT GGTGCAGTCG
GGCAGCTTCA AGGACCTGTC GGTGAAATGG CGCAACTCCA CCATGCGCCG GGACTTCAGC
ACCAATGCGT TCGATGAGAA CCGCCTGATC GTGAGTTACC CGCTGAATCT GCTTTGA
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| Protein sequence | MSTLQPARQL LPGLLAMSCA LPVFAANEGG FMEDAKATLN LRNFYINRNF VDPAHPQGKA
EEWTQSFILD ARSGFTQGTV GFGVDVLGLY SVKLDGGKGT TNTHLLPVHD DGRPADDFGR
LGVALKAKLS ETELKVGEWM PVLPILRSDD GRSLPQTFRG GQLTSKEIAG LTLYAGQFRG
NSPRNDASME DMSLNGKAAF TSDRFNFGGG EYTFNDKRTM IGLWDAQLKD IYRQQYLNLT
HSQPLGDWTL GANLGYFIGK EDGGERAGKL DNRTASALLS ARYQGHTFYV GLQKVSGDDA
WMRVNGTSGG TLANDSYNSS FDNAKERSWQ VRHDFNFATV GVPGLTLMNR YIKGDNVTVG
NVDDGKEWAR ETELAYVVQS GSFKDLSVKW RNSTMRRDFS TNAFDENRLI VSYPLNLL
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