| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4419 |
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| Symbol | |
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| ID | 5872227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4947181 |
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| End bp | 4948056 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641549554 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001670643 |
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| Protein GI | 167035412 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.747465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCC TCCCGCCTCT GCCTACCCTG TACACCTTTC TGGTCACTGC CCAGCACTGC
AATTTCACCC GTGCAGGGCA ACAGTTGCAC ATCACCCAGG GCGCCGTCAG CCGGCAGATC
GCAGCCCTCG AAGAGCACCT GGGTTATGCG CTGTTCAAGC GTGAGGCCCG CGGTTTGAGC
CTGACCCGTG AAGGCCAGGA CTGGCTGCCT CGGGTGCAGC AGGTGTTCGC GCTGATCGAT
CAAGGCGTGC GCGAGGTGGG CGAGCACAGC ACGACCTTGC AGCTCAAGGC GCCGACCTGC
GTGATGCGCT GGCTACTGCC ACGCCTGATG GAATGGCAAG CCCTGCGCCC GGACATACCG
GTCGAACTCA CCACCACCGT GCAGCATGGG GTGGATTTTC GCCGCGAGGG CTTTGACGCC
GCGGTGGTCT ATGGCGATGC ACCGAACCAC GGGCTGCACG TGCGCAAGTT GTTCGATGAG
CAACTGACAC CGGTATGCGC ACCGTCACTG CTTCAAGGGC CGCTGCCCTT GCAGCAGGTG
GAAGACCTGG CGCGGCACAT GCTGCTGCAC CCGTCACGAG ATGAGCATGA TTGGCGGTTG
TGGTTGCAGG CAGCAGGTGT GACGCTGGCC AGTCATGGGC CCAAGCAGCA TTTCGAGACG
CTGGACATGG CAATGGCCAT GGCCTCGCAG GGGACTGGCG TGGCTATCGG TGATTGGTCG
CTGATTGGCG ATGACTTGCG CGGGGGGCGG CTGTGCATGC CGTTTGCGCT GAAGGTGCTG
ACGGGTAAAG GTTATTACCT GGTAAGCCAG GCCAGAAGCT TGCCACCGGG TTTAGTGGAG
TTGCTGGATT GGCTGCAGCG CCAGGCTAGC CAGTGA
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| Protein sequence | MKRLPPLPTL YTFLVTAQHC NFTRAGQQLH ITQGAVSRQI AALEEHLGYA LFKREARGLS
LTREGQDWLP RVQQVFALID QGVREVGEHS TTLQLKAPTC VMRWLLPRLM EWQALRPDIP
VELTTTVQHG VDFRREGFDA AVVYGDAPNH GLHVRKLFDE QLTPVCAPSL LQGPLPLQQV
EDLARHMLLH PSRDEHDWRL WLQAAGVTLA SHGPKQHFET LDMAMAMASQ GTGVAIGDWS
LIGDDLRGGR LCMPFALKVL TGKGYYLVSQ ARSLPPGLVE LLDWLQRQAS Q
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