| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4418 |
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| Symbol | |
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| ID | 5872226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4945429 |
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| End bp | 4947066 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641549553 |
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| Product | hypothetical protein |
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| Protein accession | YP_001670642 |
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| Protein GI | 167035411 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.954696 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACCT GCGGTGAAGT ACTGGTCAAA CTCCTTGAAG GCTATGGCGT GGACCATGTC
TTCGGCATTC CCGGTGTACA TACCGTGGAG CTCTACCGTG GCCTGGCGGG TTCGTCCATT
CGCCACATCA CCCCGCGTCA CGAGCAGGGG GCCGGGTTCA TGGCTGACGG CTATGCGCGC
ACCCGTGGCA AACCCGGGGT GTGCTTCATC ATCACCGGCC CTGGCATGAC CAACATCACC
ACGGCCATGG GCCAGGCCTA TGCCGATTCG ATTCCGATGC TGGTAATTTC CAGCGTGCAG
ACCCGCGACC AGTTGGGCGG TGGCCGTGGC AAGCTGCATG AGCTGCCCAA CCAGGCCGCG
CTGGTAGCGG GTGTGGCTGC GTTTTCCCAC ACCTTGATGA GTGCCGCAGA CTTGCCGCAG
GTGCTGGCCC GAGCATTTGC CGTGTTCGAC AGTGCCCGGC CGCGCCCGGT GCACATCGAG
ATACCGCTCG ATGTACTGGT CGAACCGGCT GACTTCCTGT TGCCGGGCCG CCCGGTACGT
GGCAGCCGGG CAGGAGCGGC TCCGCAGGCG GTGGCGCAGA TGGCTGAGCG CCTGGCCAGT
GCACGTCGGC CGCTGATTCT TGCCGGTGGC GGGGCATTGG CTGCGGGGGC TGCGCTGGCA
CGCCTGGCTG AACACCTTCA GGCCCCGGTG GCGCTGACCA TCAATGCCAA AGGCTTGCTG
CCGGCCAGCC ACCCGTTGCA GATCGGTTCG ACCCAGTCGC TGCCGGCCAC ACGTGAGTTG
GTGGCCGAGG CCGACGTGGT GCTGGCGATT GGCACCGAAC TTGCCGAAAC CGATTACGAC
GTGACCTTCA AGGGCGGTTT CGAGATCCCG GGCAGCCTGC TGCGCATCGA TATCGACCCG
GACCAGACGG TGCGCAACTA CCTGCCGGAG CTGGCGCTGG TCGCCGATGC CGAGCTGGCC
GCCGAAGCGT TGTTCGGTGC CTTGCAGGCC CAGCCGCAAC CGGTGCACGA AAGCACTTGG
GGTGAGGCCC GCGTGGCCAA GCTACGCCAG GCTCTGGCAG CAGATTGGGA CCAGCCGACC
TTGAGCCAGA CGCGTTTGCT GAACGCCATT CTCGAACGCC TGCCCAATGC CATTCTGGTG
GGCGATTCCA CCCAACCGGT GTACACCGGC AACCTGACCC TGGACATGCA CCAGCCGCGT
CGCTGGTTCA ATGCCTCGAC CGGTTACGGC ACCCTGGGTT ATGCACTGCC TGCGGCCATG
GGCGCCTGGT TGGGCAGTGC CGAACAGGCC GACCAACGTG CGCCAGCGGT GTGCTTGATT
GGTGATGGCG GCTTGCAGTT CACCCTGCCG GAGCTGGCCA GTGCGGTGGA GGCGCAGGTG
CCGCTGGTCG TGCTGTTGTG GAATAACCAG GGGTACGAGG AGATCAAGAA GTACATGGTC
AACCGGGCGA TCGAGCCGGT AGGCGTGGAT ATCCATACCC CGGACTTCAT CGGTGTGGCG
CGGGCGTTGG GCGCGGCGGC GGAGCATGTG ACGGATGTGG TGCAGCTACA GGCAGCACTG
GGGCTGGCGT TGGAGCGCAA GGGGCCGACC TTGATCCAGG TTGACCAGAA CCAGTGGCAA
GAAACAGTGC TGCGATGA
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| Protein sequence | MATCGEVLVK LLEGYGVDHV FGIPGVHTVE LYRGLAGSSI RHITPRHEQG AGFMADGYAR
TRGKPGVCFI ITGPGMTNIT TAMGQAYADS IPMLVISSVQ TRDQLGGGRG KLHELPNQAA
LVAGVAAFSH TLMSAADLPQ VLARAFAVFD SARPRPVHIE IPLDVLVEPA DFLLPGRPVR
GSRAGAAPQA VAQMAERLAS ARRPLILAGG GALAAGAALA RLAEHLQAPV ALTINAKGLL
PASHPLQIGS TQSLPATREL VAEADVVLAI GTELAETDYD VTFKGGFEIP GSLLRIDIDP
DQTVRNYLPE LALVADAELA AEALFGALQA QPQPVHESTW GEARVAKLRQ ALAADWDQPT
LSQTRLLNAI LERLPNAILV GDSTQPVYTG NLTLDMHQPR RWFNASTGYG TLGYALPAAM
GAWLGSAEQA DQRAPAVCLI GDGGLQFTLP ELASAVEAQV PLVVLLWNNQ GYEEIKKYMV
NRAIEPVGVD IHTPDFIGVA RALGAAAEHV TDVVQLQAAL GLALERKGPT LIQVDQNQWQ
ETVLR
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