| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4378 |
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| Symbol | |
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| ID | 5872185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4903763 |
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| End bp | 4904728 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641549512 |
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| Product | sigma E regulatory protein, MucB/RseB |
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| Protein accession | YP_001670602 |
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| Protein GI | 167035371 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3026] Negative regulator of sigma E activity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.291181 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCGC TACCTCTCCT GTCGCTGCTG ATTGGCAGCT GCATGACGGT GCCAGCATTG
GCGGCCAACT CCTCGCCCGA GGCGAGTGAA TGGCTGAACA AGCTGGCACA GGCCGAGCAA
AAACAGAGCT ATCAAGGCTC TTTCGTCTAC GAACGCAACG GCAGCTTCTC TTCCCACGAT
ATCTGGCACA GGGTCGAGGA CGGCAAGGTC AGCGAGCGGC TGTTGCAGCT CGATGGCGCC
GCCCAGGAAA TCGTGCGCGT GGATGGCAAG GTGGCGTGTG TCAGCGGGGC CTTGGTCAGC
GGTGTTACGA CGCCGCCGGA TACCGCGCCA CGTGTACTTG ATCCGCTGAA ACTGATGGGC
TGGTACGATT TGAGTGTGGC AGGCAAGTCA CGGGTCGCCG GGCGCGACGC CGTGATCGTC
ACGCTCACGC CACGCGACCA GCACCGCTAT GCGTTCGAAT TGCATCTGGA CCGTAACACT
GGCCTGCCGC TGCGCTCGTT GATGCTCAAC GACAAGGGGC AGTTGCTGGA GCGCTTCCAG
ATGACTCGCC TCGATACCGA CGAATTACCC AGTGATGCTG ACCTGCGCCC CAGTGCCGCG
TGCAAACCGG TGCAGCATGT GGCGTCCGGC AGCAATGACA CGGTCGCCGG CTGGCGTTCG
GACTGGTTGC CACCTGGTTT CGAACTGGTC AACAGTTCGG TGCGCCAGGA CTCCAAACGC
AACAGCTCGG TCAGCAGCCT TATGTATGAC GATGGCCTGG CGCGTTTCTC GGTGTTCCTC
GAACAAGTGA ACGATGATGG CGGTACGGAC ATGCGCACCC AGCTGGGCCC GACTTCCGCT
GTCTCGCGCC GTCTGAACAC GCCCAAAGGC AAAGTGATGG TGACCGTGGT TGGCGAAATA
CCACTGGGTA CGGCAGAACG TGTCGCCTTG TCGATGCGCC CACAGGATGC CCAGGCACGT
CAATAA
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| Protein sequence | MRALPLLSLL IGSCMTVPAL AANSSPEASE WLNKLAQAEQ KQSYQGSFVY ERNGSFSSHD
IWHRVEDGKV SERLLQLDGA AQEIVRVDGK VACVSGALVS GVTTPPDTAP RVLDPLKLMG
WYDLSVAGKS RVAGRDAVIV TLTPRDQHRY AFELHLDRNT GLPLRSLMLN DKGQLLERFQ
MTRLDTDELP SDADLRPSAA CKPVQHVASG SNDTVAGWRS DWLPPGFELV NSSVRQDSKR
NSSVSSLMYD DGLARFSVFL EQVNDDGGTD MRTQLGPTSA VSRRLNTPKG KVMVTVVGEI
PLGTAERVAL SMRPQDAQAR Q
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