Gene PputGB1_4316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4316 
Symbol 
ID5872123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4830321 
End bp4830869 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content63% 
IMG OID641549450 
Productelectron transport complex protein RnfA 
Protein accessionYP_001670540 
Protein GI167035309 
COG category[C] Energy production and conversion 
COG ID[COG4657] Predicted NADH:ubiquinone oxidoreductase, subunit RnfA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGACT ACATCCTGGT CCTGATAAGC GCCGCGTTGG TCAATCACCT GTGCCTCCTG 
CAACAGCCTT TCTCCAGGCC GCATCTGCAT GTACACGGGC TGGCTGGTGC GCTGTGCATC
GCCTTGGGCG TGATCGGCGC ACAGCTGCTG CTGCGCGGGG TACTTGCCCC GCTGCACATC
CATGATCTTG CTCTGTTCCT GTTGTTGCCC TGGCTGGCAC TGCTTGCCTG GGGCCTGCCC
TGGCTAATGG CCAAGTGGCG CCCGGCCTGG CCCGTAGTGG GGTTACCAGC GCTGCTGTCG
AGCAATGCCC TGGCGCTGGG GCTGGGCCTG CAGCAGGCAA GCGACGACAG CCCCTGGTCA
GCCACGCTGC TGCAAGCCTT GCTGGCAGGA GGAGGCTTTT GGCTGGCGCT GATGGTGTTC
AGTGATCTGC GCCAACGCAG TGCCCATGCC GACATCCCTG GTGTACTGCG CGGCCTGCCC
ATCGAATTGA TCGGCGCCGG GGTAATGGCC ATGGCGTTTT CCGGTTTCAA CGGAATGTTC
GGCCAATGA
 
Protein sequence
MNDYILVLIS AALVNHLCLL QQPFSRPHLH VHGLAGALCI ALGVIGAQLL LRGVLAPLHI 
HDLALFLLLP WLALLAWGLP WLMAKWRPAW PVVGLPALLS SNALALGLGL QQASDDSPWS
ATLLQALLAG GGFWLALMVF SDLRQRSAHA DIPGVLRGLP IELIGAGVMA MAFSGFNGMF
GQ