Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4316 |
Symbol | |
ID | 5872123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 4830321 |
End bp | 4830869 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641549450 |
Product | electron transport complex protein RnfA |
Protein accession | YP_001670540 |
Protein GI | 167035309 |
COG category | [C] Energy production and conversion |
COG ID | [COG4657] Predicted NADH:ubiquinone oxidoreductase, subunit RnfA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGACT ACATCCTGGT CCTGATAAGC GCCGCGTTGG TCAATCACCT GTGCCTCCTG CAACAGCCTT TCTCCAGGCC GCATCTGCAT GTACACGGGC TGGCTGGTGC GCTGTGCATC GCCTTGGGCG TGATCGGCGC ACAGCTGCTG CTGCGCGGGG TACTTGCCCC GCTGCACATC CATGATCTTG CTCTGTTCCT GTTGTTGCCC TGGCTGGCAC TGCTTGCCTG GGGCCTGCCC TGGCTAATGG CCAAGTGGCG CCCGGCCTGG CCCGTAGTGG GGTTACCAGC GCTGCTGTCG AGCAATGCCC TGGCGCTGGG GCTGGGCCTG CAGCAGGCAA GCGACGACAG CCCCTGGTCA GCCACGCTGC TGCAAGCCTT GCTGGCAGGA GGAGGCTTTT GGCTGGCGCT GATGGTGTTC AGTGATCTGC GCCAACGCAG TGCCCATGCC GACATCCCTG GTGTACTGCG CGGCCTGCCC ATCGAATTGA TCGGCGCCGG GGTAATGGCC ATGGCGTTTT CCGGTTTCAA CGGAATGTTC GGCCAATGA
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Protein sequence | MNDYILVLIS AALVNHLCLL QQPFSRPHLH VHGLAGALCI ALGVIGAQLL LRGVLAPLHI HDLALFLLLP WLALLAWGLP WLMAKWRPAW PVVGLPALLS SNALALGLGL QQASDDSPWS ATLLQALLAG GGFWLALMVF SDLRQRSAHA DIPGVLRGLP IELIGAGVMA MAFSGFNGMF GQ
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