| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4265 |
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| Symbol | |
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| ID | 5872072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4775995 |
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| End bp | 4776861 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641549399 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001670489 |
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| Protein GI | 167035258 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.371072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGCGG CCGTACGTAC TCTGGTAACC CTGTGTGTGG TGGCTTTGGC CGTGTTGGCC
GGCTACCAGC TGTGGCAGTA CTACATGCTT ACCCCATGGA CCCGCGATGC CCGGGTGCGT
GCCGATGTGG TGGTAATCGC ACCTGATGTG TCCGGCTGGG TGCGCGAACT CAAAGTGCAT
GATAACCAGC AGGTCAAGGC CGGCGACCTG TTGATGAGTA TCGACCGTGA GCGTTTCCAG
GCCGCTTTCG ACCAGGCCAG CGCCGTGACT GAAACTCGCG CCCAGCAACT GCGTTTGCGC
GAGCGAGAGG CAGCCAGGCG AACTGCCCTG GGGCCCGAGG CGATCAGTGC CGAGTTGCGT
GAAAACGCCC AGATCAATGC CGCCATCGCG CGTGGCGAGC TACACGAGGC TGAGGCGCAG
TTGCAGGTGG CCAAGATCAA CCTGGCGCGC AGTGAAGTGC GGGCACCGCG CAGCGGGCAT
ATCACCAACC TGCGTCTGGC CGAAGGCAAC TACGTGAACA CCGGGCAAGC GGTGATGGCC
CTGGTGGATG ATTCAACTTT TTACATCCAG GCCTATTTTG AGGAAACCAA GCTGCCGCGC
ATTGGCGTAG GGGACTCGGT GAAAGTTTGG CTGATGGGCG CGGGCGAACC GATGCAGGGG
CATGTAGAGA GCATCAGCCG CGGCATCACC GACCGCAACA GCAACCCGGA CAGCCAGTTG
CTGCCGGAGG TGGAACCCAC TTTCAACTGG GTGCGGCTGG CCCAGCGGAT ACCGGTGAGG
ATTCGCCTGG ATCAGGTGCC GGAAGGGGTG ACCCTGAGTG CGGGGATGAC CGCGAGTGTG
CAAGTGCGTG AGGATCAGGA TCACTAG
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| Protein sequence | MRAAVRTLVT LCVVALAVLA GYQLWQYYML TPWTRDARVR ADVVVIAPDV SGWVRELKVH
DNQQVKAGDL LMSIDRERFQ AAFDQASAVT ETRAQQLRLR EREAARRTAL GPEAISAELR
ENAQINAAIA RGELHEAEAQ LQVAKINLAR SEVRAPRSGH ITNLRLAEGN YVNTGQAVMA
LVDDSTFYIQ AYFEETKLPR IGVGDSVKVW LMGAGEPMQG HVESISRGIT DRNSNPDSQL
LPEVEPTFNW VRLAQRIPVR IRLDQVPEGV TLSAGMTASV QVREDQDH
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