| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4213 |
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| Symbol | |
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| ID | 5872014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4708513 |
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| End bp | 4710228 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641549341 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_001670437 |
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| Protein GI | 167035206 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.280151 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACCA GTCAATATTT GCTCGCCACC CAGAAAGAAA CCCCTGCCGA CGCAGTGGTC
ATCAGCCATC AGCTCATGCT GCGTGCCGGC ATGATCCGCA AACTGGCCTC CGGCCTGTAC
ACCTGGCTGC CGATGGGCCT GCGGGTAATG CGCAAGGTCG AGGCCGTGGT GCGTGAGGAA
ATGAACGCCG CCGGCGCCCT GGAAGTGCTG ATGCCGAGCA TCCAGCCCGC CGAACTGTGG
CAGGAATCCG GTCGCTGGGA GCAGTATGGC CCTGAGCTGC TGCGCCTGAA GGATCGCCAC
CAGCGCGACT TCTGCGTCGG CCCTACCCAC GAAGAAGTGA TCACCGATCT GGCCCGTAAC
GAGCTGTCCA GCTATAAACA GCTGCCGCTC AACATGTACC AGATCCAGAC CAAGTTCCGT
GACGAGATCC GCCCACGCTT CGGCTTGATG CGTGGCCGTG AATTCATCAT GAAGGACGCC
TACTCGTTCC ATGCCGACCA GGCTTCCCTG CAGGAAACCT ACGACCGCAT GCACCAGGCG
TACAGCAACG TGTTCACCCG CCTGGGCCTG GACTTCCGGC CTGTACAGGC CGACACCGGC
TCGATCGGCG GCAGCTACTC GCACGAGTTC CACGTGCTGG CCGAGTCTGG CGAAGACGAC
GTGATCTTCA GCGACAGCTC CGATTACGCC GCCAACATCG AAAAGGCCGA GGCCATCCCG
CGTGAAACCG TGCGCCCAGC CCCTACCGAG GAACTGCGCC TGGTCGACAC TCCAGACGCC
AAGACCATCG CCCAACTGGT GGAAAACCAC GGCCTGGCGA TCGAGAAAAC CGTCAAGACC
TTGATCGTAC GCGGCGCCGA GGAAGGCAAG CTGGTGGCCC TGGTGGTACG TGGCGACCAC
GAGCTGAACG AAATCAAGGC CGCCAAGCTG GAGCAGGTTG CCGACCCGCT GATCATGGCC
ACCGACGCCG AACTGCGCGA GGCCATCGGT GCCGGCGCCG GTTCGCTCGG CCCGCTGAAC
CTGCCACTGG AGGTGGTGAT CGACCGTTCG GTTGCACTGA TGAGCGACTT CGGCATTGGC
GCCAACATCG ACGACAAACA CTACTTCGGC GTGAACTGGG AGCGTGACCT GCCGGTTCCA
CAGGTCGCCG ACCTGCGTAA CGTGGTTGAA GGCGACCCGA GCCCGGACGG CCAGGGTACC
CTGGTGATCA AGCGCGGTAT CGAAGTGGGC CACATCTTCC AGCTCGGCAC CAAGTACAGC
GAAGCACTGA AGTGCCAGGT ACTGGGCGAG AACGGCAAAC CGGTCGTTCT GTCGATGGGT
TGCTACGGCA TCGGTGTGTC CCGTGTGGTC GCAGCTGCCA TCGAGCAGAG CTATGACGAC
AAGGGCATCA TCTGGAACGA CGCCCTGGCG CCATTCCAGA TTGCCCTGGT ACCCCTGCGT
TATGAAACCG ACGTGGTCCG CGAGGCAACC GACAAGCTTT ACGCCGAACT GACCGCCGCA
GGCTTCGAAG TGCTGCTGGA CGACCGCGAC AAGAAAACCA GCCCAGGCAT CAAGTTTGCC
GACATGGAGC TGATCGGCAT CCCGCACCGC ATCGTCGTCA GCGATCGCGG CCTGGCCGAC
GGCAACCTGG AGTACAAGCA CCGCACCGAG CAGGACGCCC AGGCGCTGCC GCTCAATGAA
GTGCTGACCT TCCTGCAGGC CCGCGTTCGC CGCTGA
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| Protein sequence | MRTSQYLLAT QKETPADAVV ISHQLMLRAG MIRKLASGLY TWLPMGLRVM RKVEAVVREE
MNAAGALEVL MPSIQPAELW QESGRWEQYG PELLRLKDRH QRDFCVGPTH EEVITDLARN
ELSSYKQLPL NMYQIQTKFR DEIRPRFGLM RGREFIMKDA YSFHADQASL QETYDRMHQA
YSNVFTRLGL DFRPVQADTG SIGGSYSHEF HVLAESGEDD VIFSDSSDYA ANIEKAEAIP
RETVRPAPTE ELRLVDTPDA KTIAQLVENH GLAIEKTVKT LIVRGAEEGK LVALVVRGDH
ELNEIKAAKL EQVADPLIMA TDAELREAIG AGAGSLGPLN LPLEVVIDRS VALMSDFGIG
ANIDDKHYFG VNWERDLPVP QVADLRNVVE GDPSPDGQGT LVIKRGIEVG HIFQLGTKYS
EALKCQVLGE NGKPVVLSMG CYGIGVSRVV AAAIEQSYDD KGIIWNDALA PFQIALVPLR
YETDVVREAT DKLYAELTAA GFEVLLDDRD KKTSPGIKFA DMELIGIPHR IVVSDRGLAD
GNLEYKHRTE QDAQALPLNE VLTFLQARVR R
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