| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4154 |
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| Symbol | |
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| ID | 5871954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4641198 |
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| End bp | 4642835 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641549282 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001670380 |
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| Protein GI | 167035149 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0874139 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTACTA AAATCACCTA CAGTGACGCA CAAGAAAAAG CGATTGACTG TCTAGGCAGC
ATGGTTATCA CAGCATGCCC TGGCAGTGGG AAGACTACTG TAATGGTGGA AAAAATCCGC
CGCGAGTTTG ATAGTCTCAA ACCACATCAA GGCGTCATTG GAATTTCCTT CACCATCAAA
TCCAGCATGG AACTTGGCGA GAAGTGCAAA CGAAACGGAG CCAATATAAG ATCAAGCTTC
TTCGGGACAA TCGATAACTT TTGTCTGGCA GAGATAGTAT TTCCATTCAT AGCTAGAATC
TATGGCTTCT CCGCCAAGCA AATCTCTTGC GTACAATACA ACCAACTAGA GGACAATTAC
AAAGCAGATC TTCCTGACCT TTCGAAAACC AATATAAATC TCCAGACGAG CGACTACGAC
CTATATGAGT CGGAATTCAA AGAACACTAT CAAAAAGGGT TCATTCTTCT TGAAGCAGCC
ACGATCATTG CCTGCAAAAT CATAGAAAAA TCGGAAGCAT GCAGGCGCTA TATCAAGGCA
AGATATCGTT CTGTCTATAT AGATGAATAT CAAGACACTT CAGAGCCTCA GCACACGCTT
TTCTGTGCCC TTTACTCATT GGGTTTGAAA GCTGTAGCTG TAGGCGACAC GCAACAGTCT
ATATTTGCGT TCCGAGGCAG TGACCCTACC TATCTGTTGG CACTCACGGC AGACGCATCA
AACTTCGAAC ACCACGTCAT CAACATTAAC CATCGCAGCC ACCCCTCCAT TATCAACTAT
GCTAACCGCT TGTTCGCCCC TCAGTGCCAG CTTCTCCCTG TAGAGGAGAA TGACGTTCAG
GTATATCACA GGCGCTTCAA TGGTACACAG GAAGATGTGG CTAGCACACT TAATGAATGG
ATAGAAAAGG CGGCACGAGT TCTCAAGATT GAGGATTTAA GCGAAGTGGC AATTTTGGTG
AGATGGAATA ATTCAATCGA GCGCCTGCAA AGAAATCTTA CACTTCCTGC CAGATTTTAT
AAAGATGATC CATTATCACA GACCGTCAGT CCACTGGGAC GCTTTTTCTC CGCACTACTC
TACTTCTATT TTGACAAACG CAAGCTAGTA GAAAAAATCC TAGAAGATTT TCCGCTCCTT
AGGACCACCC CTGCTAAGCT GCGGGCCTTA AGGAAGTCGA TACATGACCT CCGTAATTTG
CAGCCAGCCA GCCTCCCACC TGCCTTTCTG GAGATCGCGC ACTCATTTCG TTTCCCAACC
GACAATCAGG CTGAACTCGG TGCTCTTGAA AAAACCATAT CGTCGCCAGA AGAAATCTTG
CACTATGAAA GCGCGCGTCC CGGTGAAATC CAGATAATGA CTCTACATAA ATCTAAAGGA
CTAGAGTTCG ATCTCGTAGT GCATTTGGAC CTTTATGATT GGGTATTTCC TACTCGCAAA
TATACTGGAA ACTTTGACGA AAAAGTTTTT CCAGATTGGG ACCAAGACTT GAACCTTCAC
TTTGTAGGAA TTACAAGAGC AAGGAAATGG TGTGTCTTGG TCACGAGTAC CCAAAGGATA
AACTCTGAAA ACAATACAAA AAACGGCAAC GCCTCTCAGT TCATGACAAT GCCCGGAATC
ACTGGACTTT ATAGGTAA
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| Protein sequence | MPTKITYSDA QEKAIDCLGS MVITACPGSG KTTVMVEKIR REFDSLKPHQ GVIGISFTIK
SSMELGEKCK RNGANIRSSF FGTIDNFCLA EIVFPFIARI YGFSAKQISC VQYNQLEDNY
KADLPDLSKT NINLQTSDYD LYESEFKEHY QKGFILLEAA TIIACKIIEK SEACRRYIKA
RYRSVYIDEY QDTSEPQHTL FCALYSLGLK AVAVGDTQQS IFAFRGSDPT YLLALTADAS
NFEHHVININ HRSHPSIINY ANRLFAPQCQ LLPVEENDVQ VYHRRFNGTQ EDVASTLNEW
IEKAARVLKI EDLSEVAILV RWNNSIERLQ RNLTLPARFY KDDPLSQTVS PLGRFFSALL
YFYFDKRKLV EKILEDFPLL RTTPAKLRAL RKSIHDLRNL QPASLPPAFL EIAHSFRFPT
DNQAELGALE KTISSPEEIL HYESARPGEI QIMTLHKSKG LEFDLVVHLD LYDWVFPTRK
YTGNFDEKVF PDWDQDLNLH FVGITRARKW CVLVTSTQRI NSENNTKNGN ASQFMTMPGI
TGLYR
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