Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4091 |
Symbol | |
ID | 5871891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4573170 |
End bp | 4574105 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641549219 |
Product | aspartyl/asparaginyl beta-hydroxylase |
Protein accession | YP_001670317 |
Protein GI | 167035086 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3555] Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTTT CCTTTGCAGC CAAGGCGGGT GTCTTGCTGG TGTTTTTCGG CAGCGTGCTG TTCGTGCACC TGCGCGGCAA GGCCCGCCTG CCGGTGTTGC GCCAGTTCGT CAACCATTCG GCGTTGTTCG CCCCCTACAA CGCGTTGATG TACCTGTTTT CCGGCGTGCC GTCCAAACCC TACCTGGACC GCCAGCGCTT CCCAGAACTG GACGTGCTGA AAGACAACTG GCAGGAGATC CGCGAAGAGG CCATGCGCCT GTTCGACGAG GGCTATATCC GCGCCGCCGA AAAGGACAAC GACGCAGGCT TTGGCTCGTT CTTCAAGAAG GGCTGGAAGC GCTTTTACCT GAAGTGGTAC GACAAACCCC TGCCGTCGGC CGAAGCTTTG TGCCCGCGCA CGGTCGAGCT GGTCAGCAGC ATCCCCAACG TCAAAGGCGC GATGTTCGCC CTGCTGCCCG GCGGCAGCCA CCTGAACCCG CACCGCGACC CATTCGCAGG CTCGCTGCGC TACCACCTGG GCCTGTCCAC GCCCAACTCC GACGCCTGCC GCATTTACGT GGATGGCCAG GAATACGCCT GGCGTGATGG CGAAGACGTG ATGTTCGACG AAACGTACGT GCACTGGGTC AAGAACGAAA CTGACGTTAC GCGGGTGATC CTGTTCTGCG ACATCGAGCG CCCACTGAGC AGCCCGCTGA TGACCCGCAT CAACCGCCAG GTCAGTGCCT TTCTCGGCCG TGCCACCGCG CCGCAGAACA CCGACGACGA GCGCGTGGGT GGGATCAACC AGGCGTATGC CTGGAGCAAG CGCTTCAGCA ACAAGATCAG CAGCCACGTG AAGCAGTTCA AGCGCGCCAA CCCCAAGGCC TACCGCGTGC TGCGGCCGGT GCTGGCGGTG GTGGTGGCTT ACGCACTGTA CCGCTGGTTG TTCTGA
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Protein sequence | MTFSFAAKAG VLLVFFGSVL FVHLRGKARL PVLRQFVNHS ALFAPYNALM YLFSGVPSKP YLDRQRFPEL DVLKDNWQEI REEAMRLFDE GYIRAAEKDN DAGFGSFFKK GWKRFYLKWY DKPLPSAEAL CPRTVELVSS IPNVKGAMFA LLPGGSHLNP HRDPFAGSLR YHLGLSTPNS DACRIYVDGQ EYAWRDGEDV MFDETYVHWV KNETDVTRVI LFCDIERPLS SPLMTRINRQ VSAFLGRATA PQNTDDERVG GINQAYAWSK RFSNKISSHV KQFKRANPKA YRVLRPVLAV VVAYALYRWL F
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