| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4082 |
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| Symbol | |
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| ID | 5871882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4536151 |
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| End bp | 4538610 |
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| Gene Length | 2460 bp |
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| Protein Length | 819 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641549210 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001670308 |
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| Protein GI | 167035077 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.671478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.825712 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAGT CCTTGCCCGG CCCGCTCAAC CCGCTTGCCA AAGCGTTACT GATCCGTCAC
TCCCTTCGCC CCCGGCACGC GTTGTCTCGC GTCGGTCTGG GCCTGGCGCT GTCCACGGCG
CTGGTTGCCC AGGTGCAGGC ACAGGAGTGG ACCCTGGATA TTCCGGCACA GTCGATGAAT
TCGGCGTTGC AGGCACTGGC CAAGCAGACC GATATGCAAT TGCTGTATAG CCCGGAGGAC
ATCAGCGGGC TGCGTTCCAC GGCGCTCAAG GGCCGGCATG ACCTGCAGTC CTCGCTGCGC
ACCCTGCTGC AGGGGACCGG GCTGCGTTAT CAGATCGATG GCAATACCGT GACCGTGACG
GCGAGTTCGG CGGGAAAGGA CGGTCAGGTC GAGCTTTCGG CGACCAACGT CAATAGCACT
GGCCTTGGCG CCACTACCGA AGGCACTGGT TCCTACACCA CGGGTGTGAC CAATACAGCC
ACCAAAATGA ACCTGTCGAT CCGCGAGACG CCACAGACCA TCACTGTGGT GACCCGCCAG
CGAATGGATG ACCAGCACCT GAGCAGCATG ACCGATGTGC TGAAGCAGAC ACCTGGCATC
ACCATGTCCC AGGATGGTGG TGAGCGCTTC AACATCTATT CTCGTGGCAG TGCCATCAAC
ACGTACCAGT TCGATGGTGT TACCACGTTT CAGGACAACC AGACTCGCAA CATGCCCAGC
ACCTTGCTGG ACATGGCCCT TTATGACCGA GTGGAGATCG TCCGTGGTGC AACGGGCCTG
ATGACGGGTG CCGGTGACCC CAGTGCGGTG GTCAACCTGA TCCGCAAGCG CCCGACGCGC
GAGTTCAAGT CCTACATCCA GGGCGATATC GGCTCCTGGG ACTACTACCG TGCCGAGGCT
GACGTTTCTG GTCCCCTGAC CAAGGAAGGC AACGTGCGCG GGCGTTTTGT CGCTGCGCAG
CAAAACAACC ACACGTTCAT GGACTGGTAC ACCCAGGACC GCAGCATCCT GTACGGTGCC
CTGGAGGCCG ACCTGACCGA CACCACCCTG GTTCGCTTCG GCATTGACCG GCAAACTTAC
AAGGTCAACG GTGCCTCGGG TGTTCCACTC ATTTTCACCA ACGGCCAGCC CACCCACTTT
TCTCGTTCGA AAAGTTCCGA CGCTCGCTGG GGTTATGACG ACTACGAAAC CACCAACTAC
ACCATGACGC TCGAACAGCA ACTGGCCAAC GACTGGCAGT TGAAAGTCTC GACCCTGTAC
ATGGACGTTG ATCGCAATAC GTTCTCTTCC TACGTTTCGA CAAGAACCAA CAGGTCATAC
CTGGAACCGG ATGGCTCAAC AACCATCAGT GCTGGCGTGG CCTCGGCGGA TCAATACCAA
AAAGGTGTTG ACGCCTCCCT GCAAGGGCCG TTTCAACTGT TTGGCCAAAG TCACGAACTC
ATTTTTGGCT ACAACTATCT TGAGTACGAG AACAAACATC GCGAATACGC CGGGCCTGAT
CAGGATATCA ACTACTTCAC GTGGGAAAAC GTGACCCCAA AACCCGGTAA AGACGAGCTT
TCGCCAAGCA TCAAATATGA CATTTTCAAC CGCCAAAGCG GCTACTACCT AGCCGGGCGG
TTCAACTTCA CCGATGACCT GCATCTGATT CTGGGCGCGC GAGCTTCCGA CTACCGCTTC
GACTACAGCC TTGGCATCAT CGACAGCCCC GATGCGCCGA CCACCTACAA CATGAAAGAG
CATGGTGTAG TGACGCCGTA TGCGGGGTTG GTCTATGACC TGACCCATGA GCAATCGGTG
TACGTCAGCT ACACCGACAT CTTCAAGCCA CAAAGCAATA TCGACGCCAG CGGCAAACCA
CTTGACCCGG AAGTCGGCAA GAACTACGAA ATGGGCTGGA AAGGCGAATT CCTGGATGGC
CGCTTGAACG CCAACGTTGC CATCTACCTG GTACAAAGGG ATAACTTCGC CGAAGAGACC
ACCGAACCTG CACCCAACGG CGGTAATGCC TACAAAGCAG TGGATGGTGC GCAAACCAAA
GGCGTGGATC TGGAGCTCTC GGGCGAAGTG CTACCTGGCT GGAACGTTTT CACCGGCTAC
AGCCACTCCC GCACCGAGGA TGCTGACGGC AACAGGCTGA CCACCCAACT GCCAATGGAC
ACCTTCCGCC TCTGGAACAC CTACCGCCTG CCAGGCGAAT GGGACAAGCT GACTGTGGGT
GGGGGCGTGA ACTGGAACTC CAAATCCACA CTGCAATATG CGCGCTATAA CAGCCACGTC
ACCCAGGATG ACTACTTCGT CACCAGCCTG ATGGCTCGCT ACCGCATCAA CCAGAACCTG
GCGGCCACGC TTAACGTCAA CAACGTATTC GACAAGAAGT ACTATGCAGG CATGGCCGGC
AGTTATGGCC ACTACGGTGC ACCACGCAAC GCTACGGTGT CACTGCGCTA CGACTTCTGA
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| Protein sequence | MSKSLPGPLN PLAKALLIRH SLRPRHALSR VGLGLALSTA LVAQVQAQEW TLDIPAQSMN
SALQALAKQT DMQLLYSPED ISGLRSTALK GRHDLQSSLR TLLQGTGLRY QIDGNTVTVT
ASSAGKDGQV ELSATNVNST GLGATTEGTG SYTTGVTNTA TKMNLSIRET PQTITVVTRQ
RMDDQHLSSM TDVLKQTPGI TMSQDGGERF NIYSRGSAIN TYQFDGVTTF QDNQTRNMPS
TLLDMALYDR VEIVRGATGL MTGAGDPSAV VNLIRKRPTR EFKSYIQGDI GSWDYYRAEA
DVSGPLTKEG NVRGRFVAAQ QNNHTFMDWY TQDRSILYGA LEADLTDTTL VRFGIDRQTY
KVNGASGVPL IFTNGQPTHF SRSKSSDARW GYDDYETTNY TMTLEQQLAN DWQLKVSTLY
MDVDRNTFSS YVSTRTNRSY LEPDGSTTIS AGVASADQYQ KGVDASLQGP FQLFGQSHEL
IFGYNYLEYE NKHREYAGPD QDINYFTWEN VTPKPGKDEL SPSIKYDIFN RQSGYYLAGR
FNFTDDLHLI LGARASDYRF DYSLGIIDSP DAPTTYNMKE HGVVTPYAGL VYDLTHEQSV
YVSYTDIFKP QSNIDASGKP LDPEVGKNYE MGWKGEFLDG RLNANVAIYL VQRDNFAEET
TEPAPNGGNA YKAVDGAQTK GVDLELSGEV LPGWNVFTGY SHSRTEDADG NRLTTQLPMD
TFRLWNTYRL PGEWDKLTVG GGVNWNSKST LQYARYNSHV TQDDYFVTSL MARYRINQNL
AATLNVNNVF DKKYYAGMAG SYGHYGAPRN ATVSLRYDF
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