Gene PputGB1_4012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4012 
Symbol 
ID5871812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4463257 
End bp4463814 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content65% 
IMG OID641549140 
Productnitroreductase 
Protein accessionYP_001670238 
Protein GI167035007 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.147997 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.000154736 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAGGCTC TCGACGCATT GCTCAACCGT GTTTCCGTGC CACGCCTGAC CGACCCGGCG 
CCCAATGCCG CTCAACGCGA GGCGCTGTTC CAGGCCGCCC TGCGTGCCCC GGACCATGGC
CAGCTGCGGC CATGGCGTTT CCTTACCATC GAAGGCCAGG GCCGCGAGAA ACTCGGCGAG
CTGTTCGCCG AAGCCGTGCA GCACAAAGGT GATGCCAGCC AGGCGGCACT GGACAAGGCT
CGTGCCATGC CCCTGCGGGC ACCGTTGCTG ATCGTGGTCA TCGCCAAGTT GCAGGACCAC
TTCAAGGTGC CCAAGTCCGA GCAGCGCCTG GCTGCGGGCT GTGCGGCGCA CGGCATTCTG
ATCGCCGCGC ATGCGCAAGG CGTCGGGGCG GTGTGGCGCA CCGGGGACAT GGCTTTTGAT
GCCCATGTGC ACAAGGGGCT GGGGTTGGCC GAGAATGAAG AGTTGATCGG TTACCTGTAT
GTCGGTACGC CGTTGACCGA GCCACGCACT GCGCCGGTGC TGGAAACTGC TGATTTTGTC
AGTGCCTGGG GCGAATAA
 
Protein sequence
MEALDALLNR VSVPRLTDPA PNAAQREALF QAALRAPDHG QLRPWRFLTI EGQGREKLGE 
LFAEAVQHKG DASQAALDKA RAMPLRAPLL IVVIAKLQDH FKVPKSEQRL AAGCAAHGIL
IAAHAQGVGA VWRTGDMAFD AHVHKGLGLA ENEELIGYLY VGTPLTEPRT APVLETADFV
SAWGE