Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4012 |
Symbol | |
ID | 5871812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4463257 |
End bp | 4463814 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641549140 |
Product | nitroreductase |
Protein accession | YP_001670238 |
Protein GI | 167035007 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.147997 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.000154736 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAGGCTC TCGACGCATT GCTCAACCGT GTTTCCGTGC CACGCCTGAC CGACCCGGCG CCCAATGCCG CTCAACGCGA GGCGCTGTTC CAGGCCGCCC TGCGTGCCCC GGACCATGGC CAGCTGCGGC CATGGCGTTT CCTTACCATC GAAGGCCAGG GCCGCGAGAA ACTCGGCGAG CTGTTCGCCG AAGCCGTGCA GCACAAAGGT GATGCCAGCC AGGCGGCACT GGACAAGGCT CGTGCCATGC CCCTGCGGGC ACCGTTGCTG ATCGTGGTCA TCGCCAAGTT GCAGGACCAC TTCAAGGTGC CCAAGTCCGA GCAGCGCCTG GCTGCGGGCT GTGCGGCGCA CGGCATTCTG ATCGCCGCGC ATGCGCAAGG CGTCGGGGCG GTGTGGCGCA CCGGGGACAT GGCTTTTGAT GCCCATGTGC ACAAGGGGCT GGGGTTGGCC GAGAATGAAG AGTTGATCGG TTACCTGTAT GTCGGTACGC CGTTGACCGA GCCACGCACT GCGCCGGTGC TGGAAACTGC TGATTTTGTC AGTGCCTGGG GCGAATAA
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Protein sequence | MEALDALLNR VSVPRLTDPA PNAAQREALF QAALRAPDHG QLRPWRFLTI EGQGREKLGE LFAEAVQHKG DASQAALDKA RAMPLRAPLL IVVIAKLQDH FKVPKSEQRL AAGCAAHGIL IAAHAQGVGA VWRTGDMAFD AHVHKGLGLA ENEELIGYLY VGTPLTEPRT APVLETADFV SAWGE
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