| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3984 |
|---|
| Symbol | |
|---|
| ID | 5871784 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 4431997 |
|---|
| End bp | 4433025 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641549112 |
|---|
| Product | arginine N-succinyltransferase |
|---|
| Protein accession | YP_001670210 |
|---|
| Protein GI | 167034979 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3138] Arginine/ornithine N-succinyltransferase beta subunit |
|---|
| TIGRFAM ID | [TIGR03243] arginine and ornithine succinyltransferase subunits
[TIGR03244] arginine N-succinyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGTTC GTCCTGTACG CAGCAGCGAT TTGCCTGCGT TGATCGAATT GGCACGCAGC
ACCGGCACCA CCGGGCTGAC CACGCTGCCG GCCAACGAAG AACGCCTGGG GCATCGCGTT
GGCTGGGCGG AAAAAAGCTT CCGCGGCGAA GCGGAGCGTG GCGACACCGA CTACCTGTTC
GTGCTGGAAA ACGACGAAGG CCTGGTGGTG GGCATCAGTG CCATTGCCGG TGCCGTAGGC
CTGCGCGAGC CGTGGTACAA CTACCGGGTC GGCCTTACGG TCAGCGCCTC GCAGGAACTG
AAGATCTACC GCGAAATCCC GACGCTGTTC CTGGCCAACG ACCTGACCGG CAATTCCGAG
CTGTGCTCGC TGTTCCTGCG CAGCGACTAC CGCTCTGGCC TCAATGGCCG CCTGCTGTCG
CGCGCACGTA TGCTGTTCAT TGCCGAGTTC CCAGAGTTGT TCGGCAAGAA GATCATTGCC
GAAATGCGCG GTATGTCTGA CGAACAGGGC CGTTCACCTT TCTGGGAAAG CCTGGGCCGG
CACTTCTTCA AGATGGAGTT CAGCCAGGCC GACTACTTGA CGGGCGTGGG CAACAAGTCG
TTCATTGCCG AACTGATGCC CAAGTTCCCG CTGTACACCT GCTTCCTGTC CGAGGCAGCG
CGCAACGTGA TCGGCCGCGT GCACAAAGAC ACCGAGCCGG CGTTGGCGAT GCTCAAGCAG
GAGGGCTTCA ACTACCAGGG CTACGTCGAT ATCTTCGATG CGGGCCCGGC CATCGAATGC
GACACCGCCA AGATCCGCGC CGTGCGCGAG AGCCAGACCC TGGTGCTGGC GGTAGGGACG
CCAGGCGATG ACGCCACCCC TTTCATCATC CACAACCGCA AGCGCGACGA CTGCCGTATC
ACGGCTGCAC CTGCGCGGCT GGCAGCCGGC ACCCTGGTGG TCGACCCGCT GACCGCCAAG
CGCCTGCGCA TGGGCGCTGG CGACAATGTG CGCGCCGTGC CGCTGTCGGC AAGCCGGGAG
GCCCAGTAA
|
|---|
| Protein sequence | MIVRPVRSSD LPALIELARS TGTTGLTTLP ANEERLGHRV GWAEKSFRGE AERGDTDYLF
VLENDEGLVV GISAIAGAVG LREPWYNYRV GLTVSASQEL KIYREIPTLF LANDLTGNSE
LCSLFLRSDY RSGLNGRLLS RARMLFIAEF PELFGKKIIA EMRGMSDEQG RSPFWESLGR
HFFKMEFSQA DYLTGVGNKS FIAELMPKFP LYTCFLSEAA RNVIGRVHKD TEPALAMLKQ
EGFNYQGYVD IFDAGPAIEC DTAKIRAVRE SQTLVLAVGT PGDDATPFII HNRKRDDCRI
TAAPARLAAG TLVVDPLTAK RLRMGAGDNV RAVPLSASRE AQ
|
|---|
| |