| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3932 |
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| Symbol | |
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| ID | 5871726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4375679 |
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| End bp | 4377034 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641549054 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001670158 |
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| Protein GI | 167034927 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.215439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGTCA AGGTGCTGCT GGTCGAGGAC GACCGCGTAT TGCGCCAGGC GCTGGGCGAT
ACCTTGGAAA TCGGCGGTTT CGCCTACCAG GCCGTGGGCA GTGCTGAAGA GGCGCTGGAG
GCTGTGCGGG GTGACGCCTT CAGCCTGGTG GTCAGTGATG TGAACATGCC TGGCATGGAT
GGGCATCAGT TGCTGAGCCA GCTGCGCCGC CAGCAACCAC AGCTGCCGGT GTTGTTGATG
ACGGCGCACG CTGCCGTCGA GCGTGCGGTC GAGGCCATGC GCCAGGGCGC CGCCGATTAC
CTGGTCAAGC CGTTCGAGCC CAAGGCGCTG TTGAGTCTTG TGCAGCGCCA TGCCGCCGGG
CGAGTGACCG GCGAAGAGGG GCCGGTGGCC TGCGAGCCTG CCAGCCGCCA ACTGCTGGAA
CTGGCCGCAC GGGTTGCGCG CAGTGACTCG ACCGTGCTGA TTTCCGGCGA GTCCGGTACC
GGCAAGGAGG TGCTGGCGCG TTACATTCAC CAGCAGTCGC CACGTGCCAC GCAACCCTTC
GTCGCGATCA ACTGCGCGGC GATCCCCGAC AACATGCTCG AAGCCACCCT GTTCGGCCAC
GAGAAGGGGG CGTTCACCGG CGCTATCGCC GCCCAGGCCG GCAAGTTCGA GCAGGCCGAA
GGCGGCACCC TGCTGCTCGA CGAAATCTCG GAAATGCCCA TGGCCTTGCA GGCCAAGCTG
CTGCGCGTGC TGCAGGAACG CGAAGTGGAG CGGGTGGGCG GCCGCAAGCC GATCAGCCTC
GACATTCGTG TGCTGGCCAC CACCAACCGT GACCTGGCGG GGGAAGTGGC AGCTGGGCGC
TTTCGCGAAG ACCTGTACTA CCGCTTGTCG GTGTTCCCGC TGGCCTGGCG CCCGCTACGT
GAGCGCCCAG GCGATATCCT GCAGCTGGCC GAGCGCTTGC TGGCGCGGCA TGTGGCCAAG
ATGAAGCATG CCCCGGTGCG CCTATCGCCG CAGGCACGCG CTTGCCTGCA GGCCTATGCC
TGGCCAGGCA ATGTGCGCGA ACTGGACAAC GCGTTGCAGC GGGCGCTGAT CCTGCAACAG
GGTGGCGTGA TCGAGGCGGC GGATTTTTGT CTGGCAGGCG CCATTCCGTT GTCGGCTGGC
ACGGAGCCAT CGCTTGAGGT GGCCGCTGAG GCCGGCGGCC TGGGTGATGA CATGCGCCGT
CACGAGTACC AGATGATCAT CGACACCCTG CGCGCCGAGC GCGGCCGCCG CAAAGAGGCG
GCCGAACGCC TGGGGATCAG CCCGCGTACC TTGCGCTATA AGCTGGCGCA GATGCGTGAT
GCCGGGTTTG ACGTCGAGGC CAGCCTTTTC GGTTGA
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| Protein sequence | MAVKVLLVED DRVLRQALGD TLEIGGFAYQ AVGSAEEALE AVRGDAFSLV VSDVNMPGMD
GHQLLSQLRR QQPQLPVLLM TAHAAVERAV EAMRQGAADY LVKPFEPKAL LSLVQRHAAG
RVTGEEGPVA CEPASRQLLE LAARVARSDS TVLISGESGT GKEVLARYIH QQSPRATQPF
VAINCAAIPD NMLEATLFGH EKGAFTGAIA AQAGKFEQAE GGTLLLDEIS EMPMALQAKL
LRVLQEREVE RVGGRKPISL DIRVLATTNR DLAGEVAAGR FREDLYYRLS VFPLAWRPLR
ERPGDILQLA ERLLARHVAK MKHAPVRLSP QARACLQAYA WPGNVRELDN ALQRALILQQ
GGVIEAADFC LAGAIPLSAG TEPSLEVAAE AGGLGDDMRR HEYQMIIDTL RAERGRRKEA
AERLGISPRT LRYKLAQMRD AGFDVEASLF G
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